Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E12
         (490 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    24   1.00 
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    24   1.00 
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    24   1.00 
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   2.3  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   2.3  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   3.1  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   7.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.3  

>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 1.00
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +3

Query: 81  NKNNYSLQINPASYVNPDHLLYF--KFIGRF-IAMALYHGRF 197
           N NNY    N  +Y N    LY+   +I +  I + +Y+G F
Sbjct: 92  NNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNF 133


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 1.00
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +3

Query: 81  NKNNYSLQINPASYVNPDHLLYF--KFIGRF-IAMALYHGRF 197
           N NNY    N  +Y N    LY+   +I +  I + +Y+G F
Sbjct: 92  NNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNF 133


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 1.00
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +3

Query: 81  NKNNYSLQINPASYVNPDHLLYF--KFIGRF-IAMALYHGRF 197
           N NNY    N  +Y N    LY+   +I +  I + +Y+G F
Sbjct: 92  NNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNF 133


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 261 DIESIDPEFYNSLVWIKDNNIDECG 335
           D+E   P+ YN  +  + N +DE G
Sbjct: 53  DVEDEKPQRYNECILKQFNIVDESG 77


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 261 DIESIDPEFYNSLVWIKDNNIDECG 335
           D+E   P+ YN  +  + N +DE G
Sbjct: 53  DVEDEKPQRYNECILKQFNIVDESG 77


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = +3

Query: 132 DHLLYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWIK 311
           D LL F  + R++ +A+   +    G         L+++L   +   +D EFY    W K
Sbjct: 44  DGLLVFYEVFRYLELAMIRWKDTEIGL-------FLHEELRRTEAFEVDLEFYLGKEWKK 96

Query: 312 DNNI 323
           + N+
Sbjct: 97  NLNL 100


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 81  NKNNYSLQINPASYVNPDHLLYF 149
           N NNY    N  +Y N    LY+
Sbjct: 92  NNNNYKYNYNNNNYNNNCKKLYY 114


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 66  LFEYANKNNYSLQINPASY 122
           L +Y N+ NYS  +N  +Y
Sbjct: 125 LNDYINRLNYSAFVNLTAY 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,747
Number of Sequences: 438
Number of extensions: 3203
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)