Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E10
         (538 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g54450.1 68416.m06024 proton-dependent oligopeptide transport...    30   0.85 
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai...    29   2.0  
At4g18240.1 68417.m02709 starch synthase-related protein contain...    29   2.6  
At3g55700.1 68416.m06188 UDP-glucoronosyl/UDP-glucosyl transfera...    29   2.6  
At1g22410.1 68414.m02802 2-dehydro-3-deoxyphosphoheptonate aldol...    29   2.6  
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei...    28   3.4  
At3g19830.1 68416.m02512 C2 domain-containing protein low simila...    28   4.5  
At2g35840.2 68415.m04401 sucrose-phosphatase 1 (SPP1) identical ...    28   4.5  
At2g35840.1 68415.m04400 sucrose-phosphatase 1 (SPP1) identical ...    28   4.5  
At4g11390.1 68417.m01837 DC1 domain-containing protein contains ...    27   6.0  

>At3g54450.1 68416.m06024 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 488

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 375 LVICSLLRASRYGLATRHGVCSNS*YLETIPTCLLWFVP 491
           +VIC L+ A R  +A  HG+  +    E +P   LW +P
Sbjct: 336 MVICGLVEAKRLKVARDHGLIDSP--KEVVPMSSLWLLP 372


>At1g44910.1 68414.m05146 FF domain-containing protein / WW
           domain-containing protein contains Pfam profiles
           PF01846: FF domain, PF00397: WW domain
          Length = 946

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 290 KLVAAFSSLSQYIPSQVTGYAASGPTSWTSYLFSPASIP 406
           K++ + S+  Q     +TG+A SGP   + Y F P+S P
Sbjct: 77  KILTSGSTQPQPNAPPMTGFATSGPPFSSPYTFVPSSYP 115


>At4g18240.1 68417.m02709 starch synthase-related protein contains
           similarity to starch synthase GI:4582783 from [Vigna
           unguiculata]
          Length = 1040

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 188 KEFREFAEALNEYVTKKLRSEQIDD 262
           KEF+E  E+L E   KK R E +DD
Sbjct: 446 KEFQETLESLKEESKKKSRDEPVDD 470


>At3g55700.1 68416.m06188 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein glucuronosyl transferase homolog,
           Lycopersicon esculentum, PIR:S39507 ;contains Pfam
           profile: PF00201 UDP-glucoronosyl and UDP-glucosyl
           transferase
          Length = 460

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
 Frame = +2

Query: 11  QLKELPGKITQVYEELVKLINNMPIIEAIKEK----WN--EGLPKDQLIAFYNQCYATFF 172
           ++K+LP   T   EEL +++N+M  +E  K      WN  E L +  L+   ++    FF
Sbjct: 178 KVKDLPVMETNEPEELYRVVNDM--VEGAKSSSGVIWNTFEDLERLSLMNCSSKLQVPFF 235

Query: 173 QILPNKEFREFAEALNEYVTKKLRSEQIDDGKSLQIIYQKLVAAFSSLS 319
            I P   F +++E        K  ++ +D      ++Y    A+F SL+
Sbjct: 236 PIGP---FHKYSEDPTPKTENKEDTDWLDKQDPQSVVY----ASFGSLA 277


>At1g22410.1 68414.m02802 2-dehydro-3-deoxyphosphoheptonate
           aldolase, putative / 3-deoxy-D-arabino-heptulosonate
           7-phosphate synthase, putative / DAHP synthetase,
           putative similar to 3-deoxy-D-arabino-heptulosonate
           7-phosphate GI:170224 from [Nicotiana tabacum],
           SP|P21357 from Solanum tuberosum; contains Pfam Class-II
           DAHP synthetase family domain PF01474
          Length = 527

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
 Frame = +2

Query: 311 SLSQYIPSQVTGYAASGPTSWTSYLFSPASIPVWSGD---ASWSLLKQLISGDYPDLLTL 481
           S  Q  P      +AS  T+  + L  P  + V  G     SW   K L   DYPDL  L
Sbjct: 38  SAVQTDPKTPAASSASAATTTPATLTKPVGVNVGKGKWAPESWRTKKALQQPDYPDLAAL 97


>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
           hsp20 family protein contains Pfam profile: PF00011
           Hsp20/alpha crystallin family
          Length = 285

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = +2

Query: 317 SQYIPSQVTGYAASGPTSWTSYLFSPASIPVWSGDASWSLLKQLISGDYPDLLTLVRTYR 496
           +++  ++ TG+ +S P     +   PA   ++    S +L K+    D P L  L   + 
Sbjct: 126 TKFSATKTTGFDSSSPAYAAPHFSKPAKEDIFFPSLSPNLQKERPKLDLPKLANLGTVWS 185

Query: 497 PRS 505
           PRS
Sbjct: 186 PRS 188


>At3g19830.1 68416.m02512 C2 domain-containing protein low
           similarity to GLUT4 vesicle protein [Rattus norvegicus]
           GI:4193489; contains Pfam profile PF00168: C2 domain
          Length = 666

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 305 FSSLSQYIPSQVTGYAASGPTSWTSYLFSPASIPVWSGDASWSLLKQLISGDYPDL 472
           F  +   +P  +  +   G   W      P S P W G ASW+ L +L++ D P L
Sbjct: 296 FGIIPVVVPVGIRDFDIDGEL-WVKLRLIP-SAP-WVGAASWAFLTKLLTEDLPRL 348


>At2g35840.2 68415.m04401 sucrose-phosphatase 1 (SPP1) identical to
           sucrose-phosphatase (SPP1) [Arabidopsis thaliana]
           GI:11127757
          Length = 422

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 17/67 (25%), Positives = 31/67 (46%)
 Frame = +2

Query: 86  IEAIKEKWNEGLPKDQLIAFYNQCYATFFQILPNKEFREFAEALNEYVTKKLRSEQIDDG 265
           +EA+  KW+ G+ K +   F         +  P+K      ++  + VTK+L    +  G
Sbjct: 95  VEALNNKWDLGIVKQEASNFPELKLQAETEQRPHKVSFYVEKSKAQEVTKELSQRFLKRG 154

Query: 266 KSLQIIY 286
             ++IIY
Sbjct: 155 LDVKIIY 161


>At2g35840.1 68415.m04400 sucrose-phosphatase 1 (SPP1) identical to
           sucrose-phosphatase (SPP1) [Arabidopsis thaliana]
           GI:11127757
          Length = 422

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 17/67 (25%), Positives = 31/67 (46%)
 Frame = +2

Query: 86  IEAIKEKWNEGLPKDQLIAFYNQCYATFFQILPNKEFREFAEALNEYVTKKLRSEQIDDG 265
           +EA+  KW+ G+ K +   F         +  P+K      ++  + VTK+L    +  G
Sbjct: 95  VEALNNKWDLGIVKQEASNFPELKLQAETEQRPHKVSFYVEKSKAQEVTKELSQRFLKRG 154

Query: 266 KSLQIIY 286
             ++IIY
Sbjct: 155 LDVKIIY 161


>At4g11390.1 68417.m01837 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 514

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 248 EQIDDGKSLQIIYQKLVAAFSSLSQYIPSQVTGYAASG 361
           E+I+D K   +IY  ++  FS    Y+   V G+   G
Sbjct: 132 EEIEDIKPYVVIYGNIIQHFSHKEHYLRFHVNGFFRDG 169


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,067,254
Number of Sequences: 28952
Number of extensions: 249953
Number of successful extensions: 739
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)