Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E09
(479 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016444-11|AAB65922.1| 203|Caenorhabditis elegans Hypothetical... 30 1.00
Z72509-6|CAA96650.1| 223|Caenorhabditis elegans Hypothetical pr... 28 3.1
AC024876-8|AAF60889.1| 187|Caenorhabditis elegans Hypothetical ... 28 4.0
Z66520-9|CAA91390.2| 335|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z66520-4|CAE48504.1| 174|Caenorhabditis elegans Hypothetical pr... 27 5.3
AC024750-1|AAF60437.2| 240|Caenorhabditis elegans Hypothetical ... 27 5.3
Z83236-5|CAB05784.1| 315|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z83236-3|CAB05779.1| 379|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z66522-1|CAA91406.3| 425|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical ... 27 9.3
AF016670-6|AAB66103.2| 839|Caenorhabditis elegans Hypothetical ... 27 9.3
>AF016444-11|AAB65922.1| 203|Caenorhabditis elegans Hypothetical
protein C36C5.15 protein.
Length = 203
Score = 29.9 bits (64), Expect = 1.00
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 275 DTFRNISNSYLIIFDHSDYTNNRQGNRKSYARSVKYVHY 391
DT + N Y + + D N N K+Y +V+YVH+
Sbjct: 74 DTALSCLNGYACVANRKDAMNQYIENIKNYCEAVQYVHF 112
>Z72509-6|CAA96650.1| 223|Caenorhabditis elegans Hypothetical
protein F32G8.6 protein.
Length = 223
Score = 28.3 bits (60), Expect = 3.1
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 236 KSHIKKRNEEQIR-DTFRNISNSYLIIFDHSDYTNNRQGNRKSYARSVKYVHYIGKAVGR 412
K +KKRN + D +++ N+Y I H NRQG K+ R+ K + K
Sbjct: 24 KVEMKKRNGTIPKEDHLKSMCNAYQSIIQHVGEDINRQGLLKTPERAAKAMMAFTKGYDD 83
Query: 413 LLAEL 427
L EL
Sbjct: 84 QLDEL 88
>AC024876-8|AAF60889.1| 187|Caenorhabditis elegans Hypothetical
protein Y94H6A.8 protein.
Length = 187
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 149 FTIDEAAKGILSIENLDKKNKYIFYVGGFKSHIKKR 256
FT+ + K L I+ + K + + +GG K+ +KKR
Sbjct: 38 FTLQMSLKAWLGIDKIQKFGQMVKEIGGVKAVLKKR 73
>Z66520-9|CAA91390.2| 335|Caenorhabditis elegans Hypothetical
protein F49E12.5a protein.
Length = 335
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 428 AIRPTIDQQLFQYSERILLISHSSF--CSLACYLCNLSD 318
AI+ Q + QYS R+LLI+ F C Y C +D
Sbjct: 46 AIKQLCAQSIIQYSTRVLLITTILFAVCHQIAYFCFKAD 84
>Z66520-4|CAE48504.1| 174|Caenorhabditis elegans Hypothetical
protein F49E12.5b protein.
Length = 174
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 428 AIRPTIDQQLFQYSERILLISHSSF--CSLACYLCNLSD 318
AI+ Q + QYS R+LLI+ F C Y C +D
Sbjct: 61 AIKQLCAQSIIQYSTRVLLITTILFAVCHQIAYFCFKAD 99
>AC024750-1|AAF60437.2| 240|Caenorhabditis elegans Hypothetical
protein Y17G9A.2 protein.
Length = 240
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 281 FRNISNSYLIIFDHSDYTNNR--QGNRKSYARSV 376
F+ Y+I++DH+ +NN GN+ Y S+
Sbjct: 95 FKTTDEFYIIVYDHTPESNNHAFYGNKDQYIVSI 128
>Z83236-5|CAB05784.1| 315|Caenorhabditis elegans Hypothetical
protein K10H10.6 protein.
Length = 315
Score = 27.1 bits (57), Expect = 7.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 367 EISKIRSLYWKSCW 408
E+ KI YW+SCW
Sbjct: 265 EVEKISGKYWESCW 278
>Z83236-3|CAB05779.1| 379|Caenorhabditis elegans Hypothetical
protein K10H10.3a protein.
Length = 379
Score = 27.1 bits (57), Expect = 7.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 367 EISKIRSLYWKSCW 408
E+ KI YW+SCW
Sbjct: 329 EVEKISGKYWESCW 342
>Z66522-1|CAA91406.3| 425|Caenorhabditis elegans Hypothetical
protein F14E5.3 protein.
Length = 425
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 221 YVGGFKSHIKKRNEEQIRDTFRNISNSYLIIFDHSDYTNNRQ 346
Y+ +++H+ E +RD F+ IS YL + + + NR+
Sbjct: 245 YINEYRNHVPV--PEFVRDNFKTISEEYLKVRNFQNGIGNRK 284
>AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical
protein D2063.2 protein.
Length = 643
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 125 FPRNDVETFTIDEAAKGILSIENLDKKNKY 214
FP D+E +D ++IE++D+ NKY
Sbjct: 356 FPEPDIEYPRLDGINSNNMTIEDVDQMNKY 385
>AF016670-6|AAB66103.2| 839|Caenorhabditis elegans Hypothetical
protein K02F6.3 protein.
Length = 839
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 134 NDVETFTIDEAAKGILSIENLDKKNKYIFYVGGFKSHI----KKRNEEQIRDTFRNI 292
N V T TI +++ +S L+K K + VGG + K N ++ RDT RN+
Sbjct: 369 NSVNTSTILFSSQKDVSPVELEKLQKSVSEVGGCIDKLLETTMKVNFDEFRDTIRNL 425
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,758,010
Number of Sequences: 27780
Number of extensions: 208779
Number of successful extensions: 650
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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