Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E08
         (490 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...   260   7e-70
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...   260   7e-70
AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...   237   6e-63
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...   237   6e-63
X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal prot...   148   5e-36
AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p pro...    39   0.003
AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA...    39   0.003
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    33   0.21 
U54982-1|AAC16665.1|  850|Drosophila melanogaster stn-A protein.       29   3.4  
AE014298-3233|ABI31011.1|  850|Drosophila melanogaster CG12500-P...    29   3.4  
AE014298-3232|EAA46058.2|  850|Drosophila melanogaster CG12500-P...    29   3.4  
M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 cha...    28   7.9  
M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein ( Dros...    28   7.9  
BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p pro...    28   7.9  
AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA...    28   7.9  

>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score =  260 bits (637), Expect = 7e-70
 Identities = 125/149 (83%), Positives = 133/149 (89%)
 Frame = +3

Query: 42  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 221
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 222 LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 401
           LLTL+EKD KRLF+GNA           DE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 402 AKSIHHARILIRQRHIRVRKQVVNIPSFI 488
           AKSIHHAR+LIRQRHIRVRKQVVNIPSF+
Sbjct: 121 AKSIHHARVLIRQRHIRVRKQVVNIPSFV 149


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score =  260 bits (637), Expect = 7e-70
 Identities = 125/149 (83%), Positives = 133/149 (89%)
 Frame = +3

Query: 42  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 221
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 222 LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 401
           LLTL+EKD KRLF+GNA           DE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 402 AKSIHHARILIRQRHIRVRKQVVNIPSFI 488
           AKSIHHAR+LIRQRHIRVRKQVVNIPSF+
Sbjct: 121 AKSIHHARVLIRQRHIRVRKQVVNIPSFV 149


>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score =  237 bits (580), Expect = 6e-63
 Identities = 114/137 (83%), Positives = 121/137 (88%)
 Frame = +3

Query: 42  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 221
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 222 LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 401
           LLTL+EKD KRLF+GNA           DE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 402 AKSIHHARILIRQRHIR 452
           AKSIHHAR+LIRQRHIR
Sbjct: 121 AKSIHHARVLIRQRHIR 137


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score =  237 bits (580), Expect = 6e-63
 Identities = 114/137 (83%), Positives = 121/137 (88%)
 Frame = +3

Query: 42  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 221
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 222 LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 401
           LLTL+EKD KRLF+GNA           DE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 402 AKSIHHARILIRQRHIR 452
           AKSIHHAR+LIRQRHIR
Sbjct: 121 AKSIHHARVLIRQRHIR 137


>X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal protein
           protein.
          Length = 197

 Score =  148 bits (358), Expect = 5e-36
 Identities = 82/149 (55%), Positives = 97/149 (65%)
 Frame = +3

Query: 42  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 221
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGL+  R V  VKY LA+IRK ARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARE 59

Query: 222 LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 401
           LLTL+EKD KRLF+G +            +   +     G +    L         +AGL
Sbjct: 60  LLTLDEKDAKRLFQGKSLVRRLVRIGVL-KSPHEARLRAGSEDSGLLGASSADAGVQAGL 118

Query: 402 AKSIHHARILIRQRHIRVRKQVVNIPSFI 488
           AKSIHHAR+LIRQR   +  +   IPSF+
Sbjct: 119 AKSIHHARVLIRQRTFVLASRWSTIPSFV 147



 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +2

Query: 320 ETGLCARFED*GLLGAPSSDSGVQ 391
           E  L A  ED GLLGA S+D+GVQ
Sbjct: 92  EARLRAGSEDSGLLGASSADAGVQ 115


>AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p
           protein.
          Length = 181

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 24/122 (19%), Positives = 51/122 (41%)
 Frame = +3

Query: 123 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXX 302
           +E KI+  + ++ + +  +       IR+ A  +  L+  +P +  E             
Sbjct: 28  KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKT-EATTMLLNKLHAMG 86

Query: 303 XDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPS 482
               Q+ L+    +    F  RRL   + K  +++ +  A  LI   H+RV  +++  P+
Sbjct: 87  VSNDQLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPA 146

Query: 483 FI 488
           F+
Sbjct: 147 FL 148


>AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA
           protein.
          Length = 181

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 24/122 (19%), Positives = 51/122 (41%)
 Frame = +3

Query: 123 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXX 302
           +E KI+  + ++ + +  +       IR+ A  +  L+  +P +  E             
Sbjct: 28  KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKT-EATTMLLNKLHAMG 86

Query: 303 XDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPS 482
               Q+ L+    +    F  RRL   + K  +++ +  A  LI   H+RV  +++  P+
Sbjct: 87  VSNDQLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPA 146

Query: 483 FI 488
           F+
Sbjct: 147 FL 148


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 353  GLLGAPSSDSGVQGWSCEVNPSCPHLDQTEAYSC 454
            GL G P+S  G  G+ C+V+  CP+      Y C
Sbjct: 9018 GLSGDPTSVIGCHGYECQVDADCPNSKACMGYRC 9051


>U54982-1|AAC16665.1|  850|Drosophila melanogaster stn-A protein.
          Length = 850

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -3

Query: 482 RRNVHHLLADTNMPLSDQDAGMMD*LRKTSLEHLSLKTALQEVLNLQTEHI---IQFHLF 312
           R+ + +LL   ++ L+D +A ++        +H +L   L E L+  +  I   +  HL 
Sbjct: 277 RKGIQNLLLSESIELADSEAELLAATSNAEPQH-NLLDDLDEELSESSVPIDLSVSLHLH 335

Query: 311 LIKHSDP 291
           LIKH  P
Sbjct: 336 LIKHKQP 342


>AE014298-3233|ABI31011.1|  850|Drosophila melanogaster CG12500-PB,
           isoform B protein.
          Length = 850

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -3

Query: 482 RRNVHHLLADTNMPLSDQDAGMMD*LRKTSLEHLSLKTALQEVLNLQTEHI---IQFHLF 312
           R+ + +LL   ++ L+D +A ++        +H +L   L E L+  +  I   +  HL 
Sbjct: 277 RKGIQNLLLSESIELADSEAELLAATSNAEPQH-NLLDDLDEELSESSVPIDLSVSLHLH 335

Query: 311 LIKHSDP 291
           LIKH  P
Sbjct: 336 LIKHKQP 342


>AE014298-3232|EAA46058.2|  850|Drosophila melanogaster CG12500-PA,
           isoform A protein.
          Length = 850

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -3

Query: 482 RRNVHHLLADTNMPLSDQDAGMMD*LRKTSLEHLSLKTALQEVLNLQTEHI---IQFHLF 312
           R+ + +LL   ++ L+D +A ++        +H +L   L E L+  +  I   +  HL 
Sbjct: 277 RKGIQNLLLSESIELADSEAELLAATSNAEPQH-NLLDDLDEELSESSVPIDLSVSLHLH 335

Query: 311 LIKHSDP 291
           LIKH  P
Sbjct: 336 LIKHKQP 342


>M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 chain
            protein.
          Length = 1639

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 341  FED*GLLGAPSSDSGVQGWSCEVNPSCPHLDQTEAYSC 454
            F   G       +SG +G+ C+ N  CP  D  E   C
Sbjct: 996  FSSEGCKPCECDESGSKGFQCDQNGQCPCNDNVEGRRC 1033


>M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein (
            Drosophila mRNA forlaminin B2 chain. ).
          Length = 1639

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 341  FED*GLLGAPSSDSGVQGWSCEVNPSCPHLDQTEAYSC 454
            F   G       +SG +G+ C+ N  CP  D  E   C
Sbjct: 996  FSSEGCKPCECDESGSKGFQCDQNGQCPCNDNVEGRRC 1033


>BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p protein.
          Length = 1639

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 341  FED*GLLGAPSSDSGVQGWSCEVNPSCPHLDQTEAYSC 454
            F   G       +SG +G+ C+ N  CP  D  E   C
Sbjct: 996  FSSEGCKPCECDESGSKGFQCDQNGQCPCNDNVEGRRC 1033


>AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA
            protein.
          Length = 1639

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 341  FED*GLLGAPSSDSGVQGWSCEVNPSCPHLDQTEAYSC 454
            F   G       +SG +G+ C+ N  CP  D  E   C
Sbjct: 996  FSSEGCKPCECDESGSKGFQCDQNGQCPCNDNVEGRRC 1033


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,043,795
Number of Sequences: 53049
Number of extensions: 445761
Number of successful extensions: 1348
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)