Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E07
         (179 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)                   28   1.1  
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   1.4  
SB_1158| Best HMM Match : Toxin_24 (HMM E-Value=0.57)                  26   4.3  

>SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)
          Length = 304

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 178 HIYHPHCLHCQICYLHQIWNRRFHGYYSNHQTFSIL 71
           H YH H LH    + H  W+   H +  +H +F+ +
Sbjct: 157 HYYHHHLLH----HHHHHWHHHHHHHRHHHHSFTTI 188


>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 829

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 175 IYHPHCLHCQICYLHQIWNRRFH 107
           +YH HC  C  C+   +   RFH
Sbjct: 728 VYHLHCFTCTTCHNQLVPGDRFH 750


>SB_1158| Best HMM Match : Toxin_24 (HMM E-Value=0.57)
          Length = 497

 Score = 26.2 bits (55), Expect = 4.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 174 STTPTASIAKFVTSTKFGTAVSTAIIPTTRH 82
           S T  +++AK + +T+F T    + +P  +H
Sbjct: 324 SATQVSNVAKVLNATRFETTFQQSFVPIIQH 354


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,277,022
Number of Sequences: 59808
Number of extensions: 54126
Number of successful extensions: 120
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 16,821,457
effective HSP length: 38
effective length of database: 14,548,753
effective search space used: 305523813
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)