Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E07
         (179 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   1.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   1.3  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         21   4.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   4.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           20   9.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    20   9.1  

>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 114 VSTAIIPTTRHFLF*VRTDDVNSNFRFM 31
           VST   PT RHF      D+ N NF ++
Sbjct: 132 VSTTETPT-RHFFCCCSGDNCNGNFSYL 158


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 47  VILDLCPSRVRL 12
           V LDLCP RV+L
Sbjct: 911 VSLDLCPQRVKL 922


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 124 WNRRFHGYYSNH 89
           W  R HGYY+N+
Sbjct: 197 WIIRPHGYYANY 208


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein
          protein.
          Length = 1133

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 75 F*VRTDDVNSNFRFMS 28
          F +RT D+N+ FRF++
Sbjct: 44 FFLRTFDLNNGFRFIA 59


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 174  STTPTASIAKFVTS 133
            ++TP+ S+A+ VTS
Sbjct: 1319 NSTPSRSVARIVTS 1332


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = -2

Query: 169  HPHCLHCQICY 137
            H  CL C  CY
Sbjct: 1027 HQGCLDCPACY 1037


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,533
Number of Sequences: 2352
Number of extensions: 2145
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 38
effective length of database: 474,603
effective search space used:  9966663
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)