BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E05
(451 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein. 25 1.6
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 2.2
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 3.8
AY748845-1|AAV28191.1| 102|Anopheles gambiae cytochrome P450 pr... 23 5.0
DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein. 23 6.6
AY324307-1|AAQ89692.1| 154|Anopheles gambiae insulin-like pepti... 22 8.7
AY176051-1|AAO19582.1| 522|Anopheles gambiae cytochrome P450 CY... 22 8.7
>AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein.
Length = 93
Score = 24.6 bits (51), Expect = 1.6
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +3
Query: 204 WPRIYSPCWAAKRPQLLLMS 263
WPR + CW ++R +L +++
Sbjct: 26 WPRPPTSCWPSRRSRLCIIA 45
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 24.2 bits (50), Expect = 2.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 56 TITTHSQMLHHTFHY 12
T+ TH + H TFHY
Sbjct: 628 TVATHQFIQHFTFHY 642
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.4 bits (48), Expect = 3.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 60 KHHNYTLSNAPPYFSLF 10
+ HN L N PP+F +F
Sbjct: 250 RKHNIPLPNNPPWFVIF 266
>AY748845-1|AAV28191.1| 102|Anopheles gambiae cytochrome P450
protein.
Length = 102
Score = 23.0 bits (47), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 59 NTITTHSQMLHHTFHYFP 6
+TI + MLHH YFP
Sbjct: 7 STIVFGTYMLHHNPEYFP 24
>DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein.
Length = 595
Score = 22.6 bits (46), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 127 NSRCKTNI-LFSAIHVSCLSDLKNALR 204
N KT+I LF +H+S DLK L+
Sbjct: 332 NMAIKTSIILFPKMHISNTMDLKRVLQ 358
>AY324307-1|AAQ89692.1| 154|Anopheles gambiae insulin-like peptide
1 precursor protein.
Length = 154
Score = 22.2 bits (45), Expect = 8.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 214 FTRRVGRQSVPSCC 255
F RRV RQ V CC
Sbjct: 126 FHRRVRRQVVAECC 139
>AY176051-1|AAO19582.1| 522|Anopheles gambiae cytochrome P450
CYP12F1 protein.
Length = 522
Score = 22.2 bits (45), Expect = 8.7
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 233 GKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSS 385
GK A +EK G ++ EKL K +L ++I AG SS
Sbjct: 281 GKIDEAVRRIEKAPKMEGTQSVLEKLLKTNKQLAVVMAFDMIMAGIDTTSS 331
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,392
Number of Sequences: 2352
Number of extensions: 6398
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -