Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E05
         (451 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   3.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   3.6  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   3.6  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   4.7  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   8.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 256 SSSWGRFAAQHGE*IRGHVTHFLSR*DTKRVL 161
           +++W R     G+ ++  V   L+R DT+ V+
Sbjct: 123 TAAWARVHVNEGQFLKAFVAAVLTRQDTQSVI 154


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 302 EKLKKVISELNGKNV 346
           +KLKK + E  GKN+
Sbjct: 154 DKLKKKLEEWTGKNI 168


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 302 EKLKKVISELNGKNV 346
           +KLKK + E  GKN+
Sbjct: 169 DKLKKKLEEWTGKNI 183


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 302 EKLKKVISELNGKNV 346
           +KLKK + E  GKN+
Sbjct: 57  DKLKKKLEEWTGKNI 71


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 260 VEKILSSVGIEADSEKLKKVISELNGK 340
           V K +  +GI    +K+K ++ EL  K
Sbjct: 28  VGKGMKVIGIAPQVDKMKTLVEELKSK 54


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +3

Query: 66  ILYF*SYNEINKLNFQXXXXXLEVQDEHFVFGNTRFVS*RLKK 194
           +LYF + N+  + N       L +    ++ G  +F+S ++KK
Sbjct: 81  VLYFINKNDKYEENTILTTMPLLINVVKYLGGKHKFISKKIKK 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,933
Number of Sequences: 438
Number of extensions: 1550
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)