Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E04
(573 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 281 6e-75
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 233 3e-60
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 191 1e-47
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 154 2e-36
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 141 9e-33
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 139 4e-32
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 134 1e-30
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 124 1e-27
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 119 6e-26
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 118 7e-26
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 117 2e-25
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 117 2e-25
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 110 2e-23
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 7e-18
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 87 4e-16
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 50 5e-05
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 44 0.002
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 41 0.018
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 40 0.031
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 40 0.055
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 38 0.13
UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|R... 38 0.22
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.22
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 37 0.39
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.39
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.51
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.51
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 36 0.89
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.89
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 34 2.7
UniRef50_Q3EB00 Cluster: Uncharacterized protein At3g26180.2; n=... 33 4.8
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_Q9ZCK0 Cluster: Dephospho-CoA kinase; n=10; Rickettsia|... 33 4.8
UniRef50_UPI0000D575D2 Cluster: PREDICTED: similar to CG13868-PA... 33 6.3
UniRef50_Q4PDP5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 281 bits (690), Expect = 6e-75
Identities = 132/148 (89%), Positives = 140/148 (94%)
Frame = +1
Query: 130 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 309
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 310 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 489
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 490 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 573
GRAGTVRRQAVDVSPLRRVNQAIWLLCT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 156
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 233 bits (569), Expect = 3e-60
Identities = 110/142 (77%), Positives = 126/142 (88%), Gaps = 1/142 (0%)
Frame = +1
Query: 151 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 327
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 328 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 507
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG V
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 508 RRQAVDVSPLRRVNQAIWLLCT 573
RRQAVD+SPLRRVNQAI+LL T
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTT 149
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 191 bits (465), Expect = 1e-47
Identities = 97/138 (70%), Positives = 113/138 (81%)
Frame = +1
Query: 154 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 333
IKLF ++ V+V D+SL DYI++ + LPH+AGR+ KRFRKA+C IVERLTNSL
Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQTKRFRKARCFIVERLTNSL 75
Query: 334 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR 513
MM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+ GPREDSTRIG AGTVRR
Sbjct: 76 MMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRR 135
Query: 514 QAVDVSPLRRVNQAIWLL 567
QAVDVSPLRRVNQA+ L+
Sbjct: 136 QAVDVSPLRRVNQALALI 153
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 154 bits (373), Expect = 2e-36
Identities = 66/139 (47%), Positives = 99/139 (71%)
Frame = +1
Query: 151 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 330
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 331 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 510
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G +
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKK 138
Query: 511 RQAVDVSPLRRVNQAIWLL 567
R+AVDVSP R+++QAI+ +
Sbjct: 139 REAVDVSPYRKISQAIYFI 157
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 141 bits (342), Expect = 9e-33
Identities = 72/139 (51%), Positives = 96/139 (69%)
Frame = +1
Query: 151 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 330
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 331 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 510
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I G
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISY 128
Query: 511 RQAVDVSPLRRVNQAIWLL 567
+AVD SP RR++ A+ L+
Sbjct: 129 HEAVDSSPQRRLDIALRLI 147
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 139 bits (337), Expect = 4e-32
Identities = 71/141 (50%), Positives = 100/141 (70%)
Frame = +1
Query: 136 PADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVE 315
P + EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI E
Sbjct: 17 PLGMAEINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAE 74
Query: 316 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGR 495
R SLM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGR
Sbjct: 75 RFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGR 134
Query: 496 AGTVRRQAVDVSPLRRVNQAI 558
AG++RR +VDVSPL+R++ AI
Sbjct: 135 AGSMRRTSVDVSPLKRISIAI 155
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 134 bits (325), Expect = 1e-30
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 154 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 333
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 334 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR 513
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYS 155
Query: 514 QAVDVSPLRRVNQAI-WL 564
+VDVSP RR++ A+ W+
Sbjct: 156 VSVDVSPQRRLDLALRWI 173
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 124 bits (299), Expect = 1e-27
Identities = 62/137 (45%), Positives = 90/137 (65%)
Frame = +1
Query: 157 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 336
KLFG+W ++ D S + Y++V + H+ GR+A K+F+K++ IVERL N LM
Sbjct: 29 KLFGKWDVAEIHYEDPSTRRYLAVTP-----VAHTMGRHAQKQFKKSEISIVERLANRLM 83
Query: 337 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 516
G N GKK A++IV+ AF+I+H T ENP+QVLV+A+ N+ PRE++ R+ G Q
Sbjct: 84 KTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQ 143
Query: 517 AVDVSPLRRVNQAIWLL 567
AVD +P RRV+QA+ L
Sbjct: 144 AVDTAPQRRVDQALKFL 160
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 119 bits (286), Expect = 6e-26
Identities = 57/134 (42%), Positives = 90/134 (67%)
Frame = +1
Query: 157 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 336
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 337 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 516
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G +
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPK 122
Query: 517 AVDVSPLRRVNQAI 558
AVD +P RRV+ A+
Sbjct: 123 AVDTAPQRRVDTAL 136
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 118 bits (285), Expect = 7e-26
Identities = 73/162 (45%), Positives = 97/162 (59%), Gaps = 17/162 (10%)
Frame = +1
Query: 124 PLPQPADIP-EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQ 300
PL + IP EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA
Sbjct: 7 PLQERFFIPHEIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKAN 63
Query: 301 CPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPL 432
IVERL N +M G + N KK+ A +VK AF+II TG+NP+
Sbjct: 64 VHIVERLINKVMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPI 123
Query: 433 QVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 558
QVLV AI N+ PRED+T + G AVD+SPLRR++ A+
Sbjct: 124 QVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPLRRLDVAL 165
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 117 bits (282), Expect = 2e-25
Identities = 62/145 (42%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Frame = +1
Query: 130 PQPADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQC 303
P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F KA
Sbjct: 10 PEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEFNKANM 66
Query: 304 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 483
IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GPRE++
Sbjct: 67 MIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGPREETV 126
Query: 484 RIGRAGTVRRQAVDVSPLRRVNQAI 558
R+ G ++VD +PLRRV+ AI
Sbjct: 127 RLKYGGINVPKSVDTAPLRRVDSAI 151
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 117 bits (281), Expect = 2e-25
Identities = 63/135 (46%), Positives = 84/135 (62%)
Frame = +1
Query: 151 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 330
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 331 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 510
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAF 124
Query: 511 RQAVDVSPLRRVNQA 555
Q+VDVSP RR++ A
Sbjct: 125 LQSVDVSPSRRLDTA 139
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 110 bits (265), Expect = 2e-23
Identities = 52/59 (88%), Positives = 55/59 (93%)
Frame = +1
Query: 397 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCT 573
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCT
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCT 232
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 7e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 295 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 450
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 86.6 bits (205), Expect = 4e-16
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Frame = +1
Query: 187 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 363
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 364 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 543
A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G ++VDVSP RR
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGGIAVPKSVDVSPSRR 124
Query: 544 VNQAI 558
+++A+
Sbjct: 125 LDEAL 129
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +1
Query: 61 MAEENWTEEVADAGGMVVDNMPLPQPADIPEIKLFGRWSCYDVQVSDMSLQDYIS 225
M+E + + V + P+ QPA++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 49.6 bits (113), Expect = 5e-05
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +1
Query: 280 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 459
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 460 SGP--REDSTRIGRAGTVRRQAVDVSPLRRVNQAI-WLL 567
+ P + RIG G+ + V+VS R N ++ W++
Sbjct: 69 ASPVVEVKARRIG--GSTYQVPVEVSGFRATNLSLRWII 105
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/87 (29%), Positives = 45/87 (51%)
Frame = +1
Query: 268 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 447
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 448 AIINSGPREDSTRIGRAGTVRRQAVDV 528
+ GP +T+ G +++ V +
Sbjct: 161 TLDKLGPLV-NTKTMSTGVAKKRVVPI 186
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 41.1 bits (92), Expect = 0.018
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +1
Query: 316 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRI 489
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI P + + RI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAIKKVTPLVEVKARRI 80
Query: 490 GRAGTVRRQAVDVSPLRRVNQAI-WL 564
G G+ + ++V R N A+ W+
Sbjct: 81 G--GSTYQVPMEVRAFRGTNLALRWI 104
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 40.3 bits (90), Expect = 0.031
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = +1
Query: 271 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 450
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 451 IINSGPREDSTRIGRAGTVRRQAVDVSPLRR 543
+ P +T++ + G + + V PL++
Sbjct: 174 LDKMAPLM-ATKVQKTGAAKNRTVPY-PLKK 202
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 39.5 bits (88), Expect = 0.055
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 274 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 453
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 454 INSGPRED-STRIGRAGTVRRQAVDVSPLRRVNQAI-WLL 567
P TR + G+ R+ +++ + AI WLL
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRKVPIEIGSKQGRALAIRWLL 106
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 38.3 bits (85), Expect = 0.13
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = -2
Query: 401 ISKACLTIRTAISFLPLLRPCIIKELVKRSTIGH*ALRNRL*AYLPAECGKYFAY 237
+SKA LT+ A FLP+ P I + ST+G L RL + LP CG+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|Rep:
30S ribosomal protein S7 - Elegia fenestrata
Length = 217
Score = 37.5 bits (83), Expect = 0.22
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +1
Query: 274 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 453
A KR K+ RL N ++ +GKK +A +I A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIYRNRLVNMVVNRIMKHGKKALAYQIFYRAAQKIQQ-TETNPLFVLREAI 65
Query: 454 INSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI-WLL 567
P+ +AG R+ +++ P + AI WLL
Sbjct: 66 RRITPQIGVKARRKAGLTRQVPIEIQPRQAKVLAIRWLL 104
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.22
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +1
Query: 310 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 468
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 36.7 bits (81), Expect = 0.39
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +1
Query: 307 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTR 486
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P + R
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMPVLE-VR 76
Query: 487 IGRAGTVRRQA-VDVSPLRRVNQAI-WLL 567
R G Q V V P RR + WL+
Sbjct: 77 ARRVGGSNYQVPVKVRPERRTTLGLRWLV 105
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 36.7 bits (81), Expect = 0.39
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 304 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 480
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 481 TRIGRAGTVRR 513
RAG++++
Sbjct: 76 KPRRRAGSIQQ 86
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 36.3 bits (80), Expect = 0.51
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +1
Query: 205 SLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 384
+LQ + + K A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 385 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 501
A + HLL NP LV AI++S ED+ G +G
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSGYSG 188
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.3 bits (80), Expect = 0.51
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 304 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 468
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 35.5 bits (78), Expect = 0.89
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 304 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 468
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.5 bits (78), Expect = 0.89
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +1
Query: 61 MAEENWTEEVADAGG-MVVDNMPLPQPADIPEIKLF--GRWSCYDVQVSDMSLQDYISVK 231
+AEENW + +ADAGG M M + +D+ E+ L+ GR + ++++ D + Y S +
Sbjct: 208 VAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH--KQYPSSE 265
Query: 232 EKYAKYLPHSAG 267
K+ + P G
Sbjct: 266 FKFKTFTPPKTG 277
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 33.9 bits (74), Expect = 2.7
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +1
Query: 316 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP--REDSTRI 489
RL N L+ +GKK +A +I+ A + I T NPL VL AI P + R+
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
Query: 490 GRAGTVRRQAVDVSPLRRVNQAI-WLL 567
G G+ + +++ + AI WLL
Sbjct: 81 G--GSTHQVPIEIGSTQGKALAIRWLL 105
>UniRef50_Q3EB00 Cluster: Uncharacterized protein At3g26180.2; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g26180.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 368
Score = 33.1 bits (72), Expect = 4.8
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 246 FCILLFYRNIILQRHVRYLNVITTPSPKKFD-FGNISRLW*WHVVHNHAARVGDFFGPVL 70
FC++ I + +++L PSP KF GN+ ++ + H + + +GPV+
Sbjct: 8 FCLITLASLIFFAKKIKHLKWNLPPSPPKFPVIGNLHQI--GELPHRSLQHLAERYGPVM 65
Query: 69 LSH 61
L H
Sbjct: 66 LLH 68
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 4.8
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 313 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 486
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 487 IG 492
IG
Sbjct: 535 IG 536
>UniRef50_Q9ZCK0 Cluster: Dephospho-CoA kinase; n=10;
Rickettsia|Rep: Dephospho-CoA kinase - Rickettsia
prowazekii
Length = 191
Score = 33.1 bits (72), Expect = 4.8
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = -1
Query: 243 CILLFYRNIILQRHVRYLNVITTPSPKKFDFGNISRLW*WHVVHNHAAR--VGDFFGPVL 70
CI Y++I+LQ + L ++ P + F+ IS L + +N AR + +F P+L
Sbjct: 34 CIKELYKDIVLQTQI--LKIL--PELEYFNIRKISNL----IYNNDIAREKLQNFIYPLL 85
Query: 69 LSHISHFYSQFTNYNLALSK 10
+ + F + TNY LA S+
Sbjct: 86 IDKLILFKKENTNYKLAFSE 105
>UniRef50_UPI0000D575D2 Cluster: PREDICTED: similar to CG13868-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG13868-PA - Tribolium castaneum
Length = 438
Score = 32.7 bits (71), Expect = 6.3
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 150 RNQTFWAMELL*RSSIGHVFAGLYFGKREVCKIFTTF 260
RN + LL R GH+ AG+YF +E C FT F
Sbjct: 324 RNLVYNFRSLLARDQKGHLIAGVYFKVKENCDEFTIF 360
>UniRef50_Q4PDP5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 850
Score = 32.3 bits (70), Expect = 8.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 435 SSGDCYY*FWSKRRLHQDRSCWYSSTSSRRCVPITSC*PGYLVI 566
+S YY W ++R D W TS+R P C P +LVI
Sbjct: 773 ASSSVYYNVWVQQRNKPDTRVWLG-TSTREATPFQLCLPDHLVI 815
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,013,138
Number of Sequences: 1657284
Number of extensions: 12478058
Number of successful extensions: 31759
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 30871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31745
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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