Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E04
(573 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 281 9e-76
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 281 9e-76
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 281 9e-76
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 281 9e-76
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 277 2e-74
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 1e-18
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 3.8
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 3.8
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 3.8
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 3.8
BC033758-1|AAH33758.1| 380|Homo sapiens centaurin, alpha 2 prot... 31 3.8
L32163-1|AAA36817.1| 622|Homo sapiens zinc finger protein protein. 29 8.8
AF011573-1|AAB84385.1| 1029|Homo sapiens zinc finger protein pro... 29 8.8
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 281 bits (690), Expect = 9e-76
Identities = 132/148 (89%), Positives = 140/148 (94%)
Frame = +1
Query: 130 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 309
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 310 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 489
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 490 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 573
GRAGTVRRQAVDVSPLRRVNQAIWLLCT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 156
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 281 bits (690), Expect = 9e-76
Identities = 132/148 (89%), Positives = 140/148 (94%)
Frame = +1
Query: 130 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 309
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 310 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 489
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 490 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 573
GRAGTVRRQAVDVSPLRRVNQAIWLLCT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 156
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 281 bits (690), Expect = 9e-76
Identities = 132/148 (89%), Positives = 140/148 (94%)
Frame = +1
Query: 130 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 309
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 310 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 489
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 490 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 573
GRAGTVRRQAVDVSPLRRVNQAIWLLCT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 156
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 281 bits (690), Expect = 9e-76
Identities = 132/148 (89%), Positives = 140/148 (94%)
Frame = +1
Query: 130 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 309
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 310 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 489
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 490 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 573
GRAGTVRRQAVDVSPLRRVNQAIWLLCT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 156
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 277 bits (679), Expect = 2e-74
Identities = 130/148 (87%), Positives = 138/148 (93%)
Frame = +1
Query: 130 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 309
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 310 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 489
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 490 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 573
GRAGTVRRQAVDVSPLRRVNQAIWLLCT
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCT 156
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 1e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 295 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 450
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 211 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 354
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 211 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 354
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 211 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 354
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 211 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 354
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC033758-1|AAH33758.1| 380|Homo sapiens centaurin, alpha 2
protein.
Length = 380
Score = 30.7 bits (66), Expect = 3.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 62 WLRRTGPKKSPTRAAWLWTTCHYHSRLIFPKS 157
++ +TGPKK P + W CH RL++ K+
Sbjct: 261 FMEKTGPKKEPFKKRWFALDCH-ERRLLYYKN 291
>L32163-1|AAA36817.1| 622|Homo sapiens zinc finger protein protein.
Length = 622
Score = 29.5 bits (63), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 326 LVKRSTIGH*ALRNRL*AYLPAECGKYFAYFS 231
++K+S IGH + R +Y +CGK F+Y S
Sbjct: 406 ILKKSLIGHQRIHTREKSYKCNDCGKVFSYRS 437
>AF011573-1|AAB84385.1| 1029|Homo sapiens zinc finger protein
protein.
Length = 1029
Score = 29.5 bits (63), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 326 LVKRSTIGH*ALRNRL*AYLPAECGKYFAYFS 231
++K+S IGH + R +Y +CGK F+Y S
Sbjct: 800 ILKKSLIGHQRIHTREKSYKCNDCGKVFSYRS 831
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,971,079
Number of Sequences: 237096
Number of extensions: 1921166
Number of successful extensions: 7579
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7579
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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