Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E03
         (427 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   4.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   4.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    22   7.9  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 379 SSGFSFVTVRTSIGRW 426
           S+ F+F+TVR  +G W
Sbjct: 523 SNDFNFLTVRVYVGCW 538


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 361  GCIMRASSGFSFVTVRTSIGRW 426
            G I   S GF++V++ ++ G W
Sbjct: 2759 GVITATSVGFAYVSIASANGSW 2780


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 93  AKTKVIQTV*QGSVLL*TLWN 155
           A+  V   V QGSVL  TLWN
Sbjct: 597 AEIAVTSGVPQGSVLGPTLWN 617


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 426,862
Number of Sequences: 2352
Number of extensions: 7891
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)