Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E03
         (427 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U68032-1|AAC51125.1|  374|Homo sapiens G protein-coupled recepto...    29   6.6  
U68030-1|AAC51124.1|  374|Homo sapiens G protein-coupled recepto...    29   6.6  
U60000-1|AAB06949.1|  378|Homo sapiens IL8-related receptor prot...    29   6.6  
AK223494-1|BAD97214.1|  374|Homo sapiens chemokine (C-C motif) r...    29   6.6  

>U68032-1|AAC51125.1|  374|Homo sapiens G protein-coupled receptor
           protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +2

Query: 236 KVFKLKSHTTYVTKIIHLALAGLTVTMKRIRXXXXXXXXXXKDASCEPPVDSASLPL 406
           K F+L+S T   TKII L + GL+V +                  CEP   + S P+
Sbjct: 152 KSFRLRSRTLPRTKIICLVVWGLSVIISSSTFVFNQKYNTQGSDVCEPKYQTVSEPI 208


>U68030-1|AAC51124.1|  374|Homo sapiens G protein-coupled receptor
           protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +2

Query: 236 KVFKLKSHTTYVTKIIHLALAGLTVTMKRIRXXXXXXXXXXKDASCEPPVDSASLPL 406
           K F+L+S T   TKII L + GL+V +                  CEP   + S P+
Sbjct: 152 KSFRLRSRTLPRTKIICLVVWGLSVIISSSTFVFNQKYNTQGSDVCEPKYQTVSEPI 208


>U60000-1|AAB06949.1|  378|Homo sapiens IL8-related receptor
           protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = +2

Query: 236 KVFKLKSHTTYVTKIIHLALAGLTVTMKRIRXXXXXXXXXXKDASCEPPVDSASLPL 406
           K F+L+S T   +KII L + GL+V +                  CEP   + S+P+
Sbjct: 152 KSFRLRSRTLPRSKIICLVVWGLSVIISSSSFVFNQKYNTLGSDVCEPKYQTVSVPI 208


>AK223494-1|BAD97214.1|  374|Homo sapiens chemokine (C-C motif)
           receptor 6 variant protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 236 KVFKLKSHTTYVTKIIHLALAGLTVTMKRIRXXXXXXXXXXKDASCEPPVDSASLPL 406
           K F+L+S T   +KII L + GL+V +                  CEP   +AS P+
Sbjct: 152 KSFRLRSRTLPRSKIICLVVWGLSVIISSSTFVFNQKYNTQGSDVCEPKYQTASEPI 208


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,244,618
Number of Sequences: 237096
Number of extensions: 1024396
Number of successful extensions: 2010
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2010
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)