Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E02
         (549 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    26   0.19 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   3.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.1  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 495 SRWPFFISTWTDLSV 539
           SRWP F++ WT + +
Sbjct: 114 SRWPLFLNEWTKIEI 128


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 70  QQHEEKTIVYVLSKKQDQPQDILVPQIENKPPTKPE-VYFVKYKNKEDS 213
           Q+   K +++ LS  + Q    L  + +      P+ +YF KYK+K DS
Sbjct: 77  QKEMTKKVIHFLSHNKQQMWKELTAKYD------PDGIYFEKYKDKFDS 119


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/36 (22%), Positives = 23/36 (63%)
 Frame = +1

Query: 49  PQVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIEN 156
           P +  V  + +EKT++ + + ++++P D  + +++N
Sbjct: 72  PALFSVLCEIKEKTVLSLRNTQEEEPPDPQLMRLDN 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.133    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,231
Number of Sequences: 336
Number of extensions: 1865
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)