Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E02
         (549 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   2.9  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   8.8  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   8.8  
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    23   8.8  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   8.8  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   8.8  

>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +2

Query: 50  HRLSLYHSNMKRRP*STFSLRNKINRKIFSCRKSKINHRQN 172
           HR++L  S  +R P S F   + I R++   +  + ++R+N
Sbjct: 167 HRVTLTQSQYRRAPISNFVESDGIWREVTRRKSRRSDNRRN 207


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +1

Query: 61  PVPQQHEEKTIVYVLSK 111
           P+PQ+ +++ I+ VLSK
Sbjct: 514 PIPQRWQDEDILVVLSK 530


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 499 GGHSSFPHGQISQSPIT 549
           G   SFPHG+ +  P+T
Sbjct: 21  GAAKSFPHGEKAPFPLT 37


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 499 GGHSSFPHGQISQSPIT 549
           G   SFPHG+ +  P+T
Sbjct: 21  GAAKSFPHGEKAPFPLT 37


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 162 WFIFDLRHENILRLILFLRENV 97
           WF  D  H +I+  +LFL + +
Sbjct: 169 WFPVDYHHSDIVYGVLFLYQTI 190


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 14/65 (21%), Positives = 28/65 (43%)
 Frame = +1

Query: 31  PSESRTPQVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKPPTKPEVYFVKYKNKED 210
           P   + PQ    PQQ +++       ++Q Q Q  + PQ+  +   + +    K + + D
Sbjct: 254 PRSQQQPQQQQQPQQKQQQLQRRQQQQQQHQGQRYVPPQLRQQAHQQQQRQQQKVRPRPD 313

Query: 211 SQAVI 225
              V+
Sbjct: 314 KIEVV 318


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.133    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 470,546
Number of Sequences: 2352
Number of extensions: 8050
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)