Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E02
         (549 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          31   2.7  
EF212156-1|ABN05232.1|  234|Homo sapiens cellular titin isoform ...    31   2.7  
EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform ...    31   2.7  
BC100934-1|AAI00935.1|  288|Homo sapiens apolipoprotein A-I bind...    31   2.7  
BC100933-1|AAI00934.1|  288|Homo sapiens apolipoprotein A-I bind...    31   2.7  
BC100931-1|AAI00932.1|  288|Homo sapiens apolipoprotein A-I bind...    31   2.7  
BC056917-1|AAH56917.1|  260|Homo sapiens APOA1BP protein protein.      31   2.7  
AL365181-7|CAI13051.1|  288|Homo sapiens apolipoprotein A-I bind...    31   2.7  
AL365181-6|CAI13050.1|  260|Homo sapiens apolipoprotein A-I bind...    31   2.7  
AL365181-5|CAI13049.1|  245|Homo sapiens apolipoprotein A-I bind...    31   2.7  
AJ315849-1|CAC86580.1|  288|Homo sapiens apoA-I binding protein ...    31   2.7  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                31   2.7  

>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 22   VKTPSESRTP--QVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKPPTKPEVYFVKY 195
            V  P +   P  +V  VP++ EEK  V VL  K+++P    VP++  KP  + +V     
Sbjct: 6630 VPVPKKKEAPPAKVPEVPKKPEEK--VPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVP 6687

Query: 196  KNKEDSQAVIDDI 234
            K  E   A + ++
Sbjct: 6688 KKVEAPPAKVPEV 6700


>EF212156-1|ABN05232.1|  234|Homo sapiens cellular titin isoform
           PEVK variant 4 protein.
          Length = 234

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 22  VKTPSESRTP--QVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKPPTKPEVYFVKY 195
           V  P +   P  +V  VP++ EEK  V VL  K+++P    VP++  KP  + +V     
Sbjct: 6   VPVPKKKEAPPAKVPEVPKKPEEK--VPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVP 63

Query: 196 KNKEDSQAVIDDI 234
           K  E   A + ++
Sbjct: 64  KKVEAPPAKVPEV 76


>EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform
           PEVK variant 3 protein.
          Length = 391

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 22  VKTPSESRTP--QVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKPPTKPEVYFVKY 195
           V  P +   P  +V  VP++ EEK  V VL  K+++P    VP++  KP  + +V     
Sbjct: 6   VPVPKKKEAPPAKVPEVPKKPEEK--VPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVP 63

Query: 196 KNKEDSQAVIDDI 234
           K  E   A + ++
Sbjct: 64  KKVEAPPAKVPEV 76


>BC100934-1|AAI00935.1|  288|Homo sapiens apolipoprotein A-I binding
           protein protein.
          Length = 288

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 187 VKYKNKEDSQAVIDDIVNDYNKGQGQTVTFSGLNSAHA 300
           VKY ++E++QAV  ++ N+Y     Q +  +GL+ A A
Sbjct: 57  VKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATA 94


>BC100933-1|AAI00934.1|  288|Homo sapiens apolipoprotein A-I binding
           protein protein.
          Length = 288

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 187 VKYKNKEDSQAVIDDIVNDYNKGQGQTVTFSGLNSAHA 300
           VKY ++E++QAV  ++ N+Y     Q +  +GL+ A A
Sbjct: 57  VKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATA 94


>BC100931-1|AAI00932.1|  288|Homo sapiens apolipoprotein A-I binding
           protein protein.
          Length = 288

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 187 VKYKNKEDSQAVIDDIVNDYNKGQGQTVTFSGLNSAHA 300
           VKY ++E++QAV  ++ N+Y     Q +  +GL+ A A
Sbjct: 57  VKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATA 94


>BC056917-1|AAH56917.1|  260|Homo sapiens APOA1BP protein protein.
          Length = 260

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 187 VKYKNKEDSQAVIDDIVNDYNKGQGQTVTFSGLNSAHA 300
           VKY ++E++QAV  ++ N+Y     Q +  +GL+ A A
Sbjct: 57  VKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATA 94


>AL365181-7|CAI13051.1|  288|Homo sapiens apolipoprotein A-I binding
           protein protein.
          Length = 288

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 187 VKYKNKEDSQAVIDDIVNDYNKGQGQTVTFSGLNSAHA 300
           VKY ++E++QAV  ++ N+Y     Q +  +GL+ A A
Sbjct: 57  VKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATA 94


>AL365181-6|CAI13050.1|  260|Homo sapiens apolipoprotein A-I binding
           protein protein.
          Length = 260

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 187 VKYKNKEDSQAVIDDIVNDYNKGQGQTVTFSGLNSAHA 300
           VKY ++E++QAV  ++ N+Y     Q +  +GL+ A A
Sbjct: 57  VKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATA 94


>AL365181-5|CAI13049.1|  245|Homo sapiens apolipoprotein A-I binding
           protein protein.
          Length = 245

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 187 VKYKNKEDSQAVIDDIVNDYNKGQGQTVTFSGLNSAHA 300
           VKY ++E++QAV  ++ N+Y     Q +  +GL+ A A
Sbjct: 57  VKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATA 94


>AJ315849-1|CAC86580.1|  288|Homo sapiens apoA-I binding protein
           protein.
          Length = 288

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 187 VKYKNKEDSQAVIDDIVNDYNKGQGQTVTFSGLNSAHA 300
           VKY ++E++QAV  ++ N+Y     Q +  +GL+ A A
Sbjct: 57  VKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATA 94


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 22    VKTPSESRTP--QVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKPPTKPEVYFVKY 195
             V  P +   P  +V  VP++ EEK  V VL  K+++P    VP++  KP  + +V     
Sbjct: 10892 VPVPKKKEAPPAKVPEVPKKPEEK--VPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVP 10949

Query: 196   KNKEDSQAVIDDI 234
             K  E   A + ++
Sbjct: 10950 KKVEAPPAKVPEV 10962


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.314    0.133    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,627,238
Number of Sequences: 237096
Number of extensions: 1108197
Number of successful extensions: 2347
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2343
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)