Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E02
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 32 0.31
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 32 0.31
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 32 0.31
AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical ... 31 0.55
U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z81491-5|CAB04021.1| 225|Caenorhabditis elegans Hypothetical pr... 30 0.95
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF000193-1|AAB52891.1| 715|Caenorhabditis elegans Hypothetical ... 27 6.7
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 8.9
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 31.9 bits (69), Expect = 0.31
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 31 PSESRTPQVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKP---PTKPEVYFVKYKN 201
P++S PQ +P+ Q ++I Q QPQ VPQ +P PT V FV
Sbjct: 298 PNQSMVPQGVPMSHQIRPQSIA---GLPQAQPQ---VPQQLQRPVSAPTGMGVQFVPVCR 351
Query: 202 KEDSQAV 222
EDSQA+
Sbjct: 352 YEDSQAI 358
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 31.9 bits (69), Expect = 0.31
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 31 PSESRTPQVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKP---PTKPEVYFVKYKN 201
P++S PQ +P+ Q ++I Q QPQ VPQ +P PT V FV
Sbjct: 564 PNQSMVPQGVPMSHQIRPQSIA---GLPQAQPQ---VPQQLQRPVSAPTGMGVQFVPVCR 617
Query: 202 KEDSQAV 222
EDSQA+
Sbjct: 618 YEDSQAI 624
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 31.9 bits (69), Expect = 0.31
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 31 PSESRTPQVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKP---PTKPEVYFVKYKN 201
P++S PQ +P+ Q ++I Q QPQ VPQ +P PT V FV
Sbjct: 564 PNQSMVPQGVPMSHQIRPQSIA---GLPQAQPQ---VPQQLQRPVSAPTGMGVQFVPVCR 617
Query: 202 KEDSQAV 222
EDSQA+
Sbjct: 618 YEDSQAI 624
>AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical
protein F42G8.8 protein.
Length = 487
Score = 31.1 bits (67), Expect = 0.55
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 251 KGKDKRSPSLVSTARMQTDS-VLAVHRDLSDPVHRDLSDPVHRDLSAQVH 397
KGK+K+ P+L++ + D L + L + D+SDP++ L+ QV+
Sbjct: 372 KGKNKKMPALITDILISMDDRFLYISFWLHGDIQYDISDPLNVKLNCQVY 421
>U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical
protein C50F2.3 protein.
Length = 855
Score = 30.7 bits (66), Expect = 0.72
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +1
Query: 49 PQVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKPPTKPEVYFVKYKNKEDSQAVID 228
P V + + K I KK ++ +D+ +EN PPT + F+ Y E+ +
Sbjct: 555 PGVFDIWNTYLVKFIKRYGGKKLERARDLFEQCLENCPPTHAKYIFLLYAKLEEEHGLAR 614
Query: 229 DIVNDYNK 252
++ YN+
Sbjct: 615 HALSIYNR 622
>Z81491-5|CAB04021.1| 225|Caenorhabditis elegans Hypothetical
protein D1086.5 protein.
Length = 225
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 67 PQQHEEKTIVYVLSKKQDQPQDILVPQIENKPPTKPEVYFVKYKNK 204
P + EKT+ V+ K DQ + + ++NK P K + ++ K+K
Sbjct: 109 PMYYCEKTLKEVIEKTPDQVSECVKDYLKNKNPDKVDCVSIQTKSK 154
>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical
protein F21H12.6 protein.
Length = 1374
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 43 RTPQVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKPPTKPEVYFVKYKNKEDSQ-- 216
+TP ++ V QQ + + S + PQ L + NK T+ E++ KY N +
Sbjct: 30 KTPLLLVVRQQGSAR-LKMTSSPPEIVPQQPLDALLLNKTDTEQEIFLTKYPNYDGRDIL 88
Query: 217 -AVIDDIVNDYNKGQGQTVT 273
A++D V+ G T T
Sbjct: 89 IAILDTGVDPSLPGMQVTTT 108
>AF000193-1|AAB52891.1| 715|Caenorhabditis elegans Hypothetical
protein T20B6.2 protein.
Length = 715
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 91 IVYVLSKKQDQPQDILVPQIENKPPTKP 174
IVY++ +K+ +PQ++ P + PP P
Sbjct: 538 IVYIMMRKKPEPQNVEKPIPKPNPPPAP 565
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/77 (22%), Positives = 30/77 (38%)
Frame = +1
Query: 22 VKTPSESRTPQVIPVPQQHEEKTIVYVLSKKQDQPQDILVPQIENKPPTKPEVYFVKYKN 201
V + + P+V P P ++ K + + + P+ E K P + K
Sbjct: 1031 VAAKPDPKIPEVPPTPVKNPVKKWKPPWEDDDEPSEPVSAPEPEKKTPVLAKKAPTKPAT 1090
Query: 202 KEDSQAVIDDIVNDYNK 252
K DS+A D + +K
Sbjct: 1091 KPDSEAAADPVSGPTSK 1107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.133 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,299,028
Number of Sequences: 27780
Number of extensions: 185654
Number of successful extensions: 446
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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