Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E01
         (418 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    28   0.032
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   8.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   8.4  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 28.3 bits (60), Expect = 0.032
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 293 TSVCWVFCFHNLVMDLYI*IIIVYMIHCRST 385
           TS+C  FCF  +   L   I + Y ++C S+
Sbjct: 523 TSICKNFCFGFITKQLIFMIFVTYQLYCWSS 553



 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -3

Query: 188 PVLVHDLQFCVTLYLKIINTWPTWHQTIATKIV 90
           P + H+LQ    +Y  +  T  TW++    +I+
Sbjct: 606 PKMRHELQKLAQVYRILGETIETWNKLFGYQIL 638


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 4/15 (26%), Positives = 11/15 (73%)
 Frame = +2

Query: 164 IEDHVPTQDIALNWY 208
           +E+H+   ++ L+W+
Sbjct: 188 VENHIEGNEVTLHWH 202


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 4/15 (26%), Positives = 11/15 (73%)
 Frame = +2

Query: 164 IEDHVPTQDIALNWY 208
           +E+H+   ++ L+W+
Sbjct: 188 VENHIEGNEVTLHWH 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,413
Number of Sequences: 336
Number of extensions: 1829
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)