Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E01
         (418 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   4.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   5.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   9.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   9.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 179 VHDLQFCVTLYLKIINTWPT 120
           VH   FC+ L ++++  +P+
Sbjct: 218 VHSSSFCIPLPVRVLPNFPS 237


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -2

Query: 327 RL*KQKTQQTLVKFL*EKKKTNHFLYKLI 241
           +L  +K ++++ K   E K+T+  LY++I
Sbjct: 371 QLKSKKLEESMRKLDEEMKRTDELLYQMI 399


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 90  NYFSCYSLMPRWPGVNN 140
           N F+C   M   PG+NN
Sbjct: 680 NPFNCNCSMDWLPGINN 696


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -1

Query: 373 MYHVDNYNLYV*IHYKIM 320
           +YH+DN++++   H+ I+
Sbjct: 273 VYHLDNHHVHHANHHAIL 290


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = +1

Query: 325 SCNGFIHINYNCLHDTLSKYTSNMD 399
           +C G +   + CL + L+ + + +D
Sbjct: 151 ACVGLLERAFRCLGNNLTAFLTTLD 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,039
Number of Sequences: 438
Number of extensions: 2255
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)