Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D24
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   0.95 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   0.95 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   3.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   6.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   8.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   8.9  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 368 HNHSSGHHMDVVVAETAAEDHGRHNLVHH 282
           +NH  GHHM         E H +H+  HH
Sbjct: 163 NNHHMGHHMQ--------EQHPQHHQPHH 183


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 368 HNHSSGHHMDVVVAETAAEDHGRHNLVHH 282
           +NH  GHHM         E H +H+  HH
Sbjct: 165 NNHHMGHHMQ--------EQHPQHHQPHH 185


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 133 VRKCIFKFWLAGVVSQIANI 74
           VRKC++K W    +S+  ++
Sbjct: 141 VRKCLYKLWKMPSLSEFLSL 160


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 133 VRKCIFKFWLAGVVSQIANI 74
           VRKC++K W    +S+  ++
Sbjct: 141 VRKCLYKLWKMPSLSEFLSL 160


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 386 HNALCHHNHSSGHHM 342
           H A+ HHN  S HH+
Sbjct: 343 HQAMLHHNPMS-HHL 356


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -2

Query: 374 CHHNHSSGHHMDVVVAETAAEDHGRHNLVHH*TSLRERG 258
           CH   SS    +     +A+  H  H  V + T   +RG
Sbjct: 138 CHQGFSSSTWCNYSAYSSASRHHVDHQPVPYLTPADDRG 176



 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 371 HHNHSSGHHMDVVVAETAAEDHGRHNLVHH 282
           +H+H +GHH+           H +H++V+H
Sbjct: 321 NHHHHAGHHI-----------HAQHHVVNH 339


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 401 ESNRVHNALCHHNHSS 354
           E  R+  A C  NH+S
Sbjct: 303 ELGRIFRAYCRENHAS 318


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 233 NLGWRPQRHEDLQ 195
           ++GW P  HE+ Q
Sbjct: 84  SVGWSPAGHEEAQ 96


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 123 ASSSSGLLALFPKSP 79
           +S+SSG L  FP +P
Sbjct: 66  SSTSSGSLGQFPATP 80


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 410 YAFESNRVHNALC 372
           Y F  N +H+ LC
Sbjct: 424 YNFNENTIHSKLC 436


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,013
Number of Sequences: 336
Number of extensions: 1884
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)