Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D24
(435 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 104 2e-23
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 104 2e-23
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 104 2e-23
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 73 9e-14
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 73 9e-14
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 64 6e-11
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 63 7e-11
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 60 5e-10
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 60 5e-10
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 60 5e-10
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 56 1e-08
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 56 1e-08
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 56 1e-08
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 54 4e-08
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 54 4e-08
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 47 5e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 44 4e-05
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 44 4e-05
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 44 4e-05
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 44 4e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 44 5e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 44 5e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 44 5e-05
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 43 8e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 42 1e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 42 1e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 42 2e-04
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 42 2e-04
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 40 8e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 40 8e-04
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 40 8e-04
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 40 8e-04
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 40 8e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 40 0.001
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 39 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 39 0.002
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 39 0.002
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 39 0.002
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 39 0.002
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 38 0.002
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 38 0.003
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 38 0.003
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 38 0.003
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 38 0.004
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 37 0.005
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 37 0.005
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 37 0.005
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 37 0.005
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 37 0.005
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.010
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 36 0.017
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 35 0.022
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 35 0.022
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 35 0.022
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 35 0.022
AC024793-5|AAF60689.1| 79|Caenorhabditis elegans Hypothetical ... 35 0.022
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 35 0.029
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.051
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.051
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 34 0.051
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 34 0.051
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 34 0.051
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 34 0.051
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.089
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 33 0.12
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 32 0.16
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 31 0.27
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 31 0.27
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 31 0.48
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 31 0.48
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 31 0.48
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 30 0.83
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 30 0.83
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 29 1.5
Z78417-9|CAI70407.1| 700|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 29 1.9
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 29 1.9
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 28 2.5
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 28 2.5
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 28 3.4
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 3.4
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 28 3.4
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z81034-5|CAB02730.1| 198|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 27 4.4
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 27 4.4
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 27 4.4
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 27 4.4
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 27 4.4
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 27 4.4
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 27 4.4
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 27 4.4
Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical pr... 27 5.9
U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2 prot... 27 5.9
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 27 5.9
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical pr... 27 7.8
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 27 7.8
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 104 bits (250), Expect = 2e-23
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDG 241
D K+YVG L ++A+ ELE+ F +G +R VWVAR PPGFAFVE++D RDAEDA+R LDG
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 242 RTICGRRARVEMS 280
ICG RARVE+S
Sbjct: 62 SRICGVRARVELS 74
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 104 bits (250), Expect = 2e-23
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDG 241
D K+YVG L ++A+ ELE+ F +G +R VWVAR PPGFAFVE++D RDAEDA+R LDG
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 242 RTICGRRARVEMS 280
ICG RARVE+S
Sbjct: 62 SRICGVRARVELS 74
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 104 bits (250), Expect = 2e-23
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDG 241
D K+YVG L ++A+ ELE+ F +G +R VWVAR PPGFAFVE++D RDAEDA+R LDG
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 242 RTICGRRARVEMS 280
ICG RARVE+S
Sbjct: 62 SRICGVRARVELS 74
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 72.9 bits (171), Expect = 9e-14
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRNVWV-ARNPPGFAFVEFEDPRDAEDAIRGLD 238
D K+YVG+L + + E+ED F YG ++ V + + P FAFVEFED RDAEDA+R D
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 239 GRTICGRRARVEMS 280
G GRR RVE +
Sbjct: 68 GYEFDGRRIRVEFT 81
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 72.9 bits (171), Expect = 9e-14
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRNVWV-ARNPPGFAFVEFEDPRDAEDAIRGLD 238
D K+YVG+L + + E+ED F YG ++ V + + P FAFVEFED RDAEDA+R D
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 239 GRTICGRRARVEMS 280
G GRR RVE +
Sbjct: 68 GYEFDGRRIRVEFT 81
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 63.7 bits (148), Expect = 6e-11
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 247
++Y+G L N AS ++E F YG L +V + +N GF FV+F+D RDA+DA+ L+G+
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDV-IMKN--GFGFVDFQDQRDADDAVHDLNGKE 59
Query: 248 ICGRRARVE 274
+CG R +E
Sbjct: 60 LCGERVILE 68
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 63.3 bits (147), Expect = 7e-11
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 11/81 (13%)
Frame = +2
Query: 68 KIYVGDLGNNASKPEL-----------EDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDA 214
++YVG++ +A++ EL E FS GP++++W+A+ PPGFAFV F+ A
Sbjct: 18 QVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHA 77
Query: 215 EDAIRGLDGRTICGRRARVEM 277
DA++ L+G+ IC A+VEM
Sbjct: 78 FDAVKYLNGKKICDLEAKVEM 98
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 60.5 bits (140), Expect = 5e-10
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 247
+IY+G L + S+ ++E F YG +R+V + +N GF FVEF+D RDAEDA+ L+G+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV-LLKN--GFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 248 ICGRRARVEMS 280
+ G R ++ S
Sbjct: 61 LGGERVILDYS 71
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 60.5 bits (140), Expect = 5e-10
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 247
+IY+G L + S+ ++E F YG +R+V + +N GF FVEF+D RDAEDA+ L+G+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV-LLKN--GFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 248 ICGRRARVEMS 280
+ G R ++ S
Sbjct: 61 LGGERVILDYS 71
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 60.5 bits (140), Expect = 5e-10
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 247
+IY+G L + S+ ++E F YG +R+V + +N GF FVEF+D RDAEDA+ L+G+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV-LLKN--GFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 248 ICGRRARVEMS 280
+ G R ++ S
Sbjct: 61 LGGERVILDYS 71
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 247
++ V +L + S +L+D G A P A + F P D + I DG
Sbjct: 130 RVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRCIEKCDGMD 189
Query: 248 ICGRRARV 271
+ GR+ ++
Sbjct: 190 LNGRKIKM 197
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 56.0 bits (129), Expect = 1e-08
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 247
++Y+G + NA + ++E YG + N+ + GFAFV+FED RDAEDA LDG+T
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDGKT 59
Query: 248 ICGRRAR--VEMS 280
+ G R VEM+
Sbjct: 60 MEGSSMRLVVEMA 72
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 56.0 bits (129), Expect = 1e-08
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 247
++Y+G + NA + ++E YG + N+ + GFAFV+FED RDAEDA LDG+T
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDGKT 59
Query: 248 ICGRRAR--VEMS 280
+ G R VEM+
Sbjct: 60 MEGSSMRLVVEMA 72
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 56.0 bits (129), Expect = 1e-08
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 247
++Y+G + NA + ++E YG + N+ + GFAFV+FED RDAEDA LDG+T
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDGKT 59
Query: 248 ICGRRAR--VEMS 280
+ G R VEM+
Sbjct: 60 MEGSSMRLVVEMA 72
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 54.0 bits (124), Expect = 4e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +2
Query: 59 GDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLD 238
G C+++VG+L N + EL++ FS +G + +++ GFAF+ + AE A +D
Sbjct: 114 GRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGK--GFAFLRLDTRAHAESAKEAID 171
Query: 239 GRTICGRRARVEMS 280
GR I GR+ RV +
Sbjct: 172 GRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 54.0 bits (124), Expect = 4e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +2
Query: 59 GDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLD 238
G C+++VG+L N + EL++ FS +G + +++ GFAF+ + AE A +D
Sbjct: 114 GRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGK--GFAFLRLDTRAHAESAKEAID 171
Query: 239 GRTICGRRARVEMS 280
GR I GR+ RV +
Sbjct: 172 GRIIHGRQVRVRFA 185
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 47.6 bits (108), Expect = 4e-06
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Frame = +2
Query: 56 YGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAED 220
Y +Y+GDL + S+ L + FS GP+ ++ V R+ G+A+V F+ P DAE
Sbjct: 54 YSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAER 113
Query: 221 AIRGLDGRTICGRRARVEMS 280
A+ ++ I GR R+ S
Sbjct: 114 ALDTMNFEVIHGRPMRIMWS 133
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 47 MSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRN--VWVARN--PPGFAFVEFEDPRDA 214
+ RY +YV ++ + + L D FS +G + + V V N GF FV FE P +A
Sbjct: 337 VQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEA 396
Query: 215 EDAIRGLDGRTI 250
A+ ++ + I
Sbjct: 397 TAAVTDMNSKMI 408
Score = 30.3 bits (65), Expect = 0.63
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN----PPGFAFVEFEDPRDAEDAIRGLD 238
++V + G + + +L FS +G + + V + P GF FV F D A A+ L+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299
Query: 239 GRTICGRRARVEM 277
+ G ++ +
Sbjct: 300 DSILEGTDCKLSV 312
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 47.6 bits (108), Expect = 4e-06
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Frame = +2
Query: 56 YGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAED 220
Y +Y+GDL + S+ L + FS GP+ ++ V R+ G+A+V F+ P DAE
Sbjct: 54 YSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAER 113
Query: 221 AIRGLDGRTICGRRARVEMS 280
A+ ++ I GR R+ S
Sbjct: 114 ALDTMNFEVIHGRPMRIMWS 133
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 47 MSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRN--VWVARN--PPGFAFVEFEDPRDA 214
+ RY +YV ++ + + L D FS +G + + V V N GF FV FE P +A
Sbjct: 337 VQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEA 396
Query: 215 EDAIRGLDGRTI 250
A+ ++ + I
Sbjct: 397 TAAVTDMNSKMI 408
Score = 30.3 bits (65), Expect = 0.63
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN----PPGFAFVEFEDPRDAEDAIRGLD 238
++V + G + + +L FS +G + + V + P GF FV F D A A+ L+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299
Query: 239 GRTICGRRARVEM 277
+ G ++ +
Sbjct: 300 DSILEGTDCKLSV 312
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 47.2 bits (107), Expect = 5e-06
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP------PGFAFVEFEDPRDAEDAIR 229
++ + +L N K LE+ FS YG ++NV + + G+ +VE+++ DAE +I+
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 230 GLDGRTICGRRARVEMS 280
+DG I G VEM+
Sbjct: 194 HMDGGQIDGMAVHVEMT 210
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 46.0 bits (104), Expect = 1e-05
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +2
Query: 59 GDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDA 223
G +YVG+ ++ EL + FS G + NV + + P GFAF+EF + A+ A
Sbjct: 3 GIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRA 62
Query: 224 IRGLDGRTICGRRARVEMSN 283
+ ++G GR RV ++N
Sbjct: 63 VEQMNGAEFNGRPLRVNLAN 82
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = +2
Query: 35 NSGIMSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFE 199
+SG+ + ++VG++ + S+ + FS G + ++ + + P G+ F+EF
Sbjct: 8 SSGVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFP 67
Query: 200 DPRDAEDAIRGLDGRTICGRRARVE 274
D + AE AIR L+G + GR RV+
Sbjct: 68 DIQTAEVAIRNLNGYELSGRILRVD 92
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAIRGL 235
+YVG++ ++ E+ + F+ G + NV + + P GFAFVEF + A+ A+ L
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 236 DGRTICGRRARVEMSN 283
+G GR RV +N
Sbjct: 68 NGVAFNGRNLRVNYAN 83
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 44.4 bits (100), Expect = 4e-05
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLR----NVWVARNPPGFAFVEFEDPRDAEDAIRGL 235
KI++G L N ++ ++++ +GPL+ NV N G+AF E+ DP + AI GL
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGL 351
Query: 236 DGRTICGRRARVEMS 280
+G + ++ V+++
Sbjct: 352 NGMQLGDKQLVVQLA 366
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 44.4 bits (100), Expect = 4e-05
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLR----NVWVARNPPGFAFVEFEDPRDAEDAIRGL 235
KI++G L N ++ ++++ +GPL+ NV N G+AF E+ DP + AI GL
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGL 351
Query: 236 DGRTICGRRARVEMS 280
+G + ++ V+++
Sbjct: 352 NGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 44.4 bits (100), Expect = 4e-05
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLR----NVWVARNPPGFAFVEFEDPRDAEDAIRGL 235
KI++G L N ++ ++++ +GPL+ NV N G+AF E+ DP + AI GL
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGL 326
Query: 236 DGRTICGRRARVEMS 280
+G + ++ V+++
Sbjct: 327 NGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 44.4 bits (100), Expect = 4e-05
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLR----NVWVARNPPGFAFVEFEDPRDAEDAIRGL 235
KI++G L N ++ ++++ +GPL+ NV N G+AF E+ DP + AI GL
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGL 329
Query: 236 DGRTICGRRARVEMS 280
+G + ++ V+++
Sbjct: 330 NGMQLGDKQLVVQLA 344
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +2
Query: 50 SRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDA 214
S Y +YVGDL + ++ L + FS GP+ ++ V R+ G+A+V F+ P DA
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 215 EDAIRGLDGRTICGRRARVEMS 280
E A+ ++ + G+ R+ S
Sbjct: 87 ERAMDTMNFEALHGKPMRIMWS 108
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +2
Query: 20 ILFT*NSGIMSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFA----F 187
I+++ M R G I++ +L + D FS +G + + VA + GF+ F
Sbjct: 105 IMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGF 164
Query: 188 VEFEDPRDAEDAIRGLDGRTICGRRARV 271
V FE A++AI+ ++G + G++ V
Sbjct: 165 VHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 47 MSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFEDPRDA 214
M +Y +YV +L L+ F YG + + V + GF FV FE P +A
Sbjct: 311 MQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEA 370
Query: 215 EDAIRGLDGRTICGR 259
A+ ++ + +C +
Sbjct: 371 TSAVTEMNSKMVCSK 385
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +2
Query: 50 SRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDA 214
S Y +YVGDL + ++ L + FS GP+ ++ V R+ G+A+V F+ P DA
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 215 EDAIRGLDGRTICGRRARVEMS 280
E A+ ++ + G+ R+ S
Sbjct: 87 ERAMDTMNFEALHGKPMRIMWS 108
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 47 MSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFEDPRDA 214
M +Y +YV +L L+ F YG + + V + GF FV FE P +A
Sbjct: 251 MQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEA 310
Query: 215 EDAIRGLDGRTICGR 259
A+ ++ + +C +
Sbjct: 311 TSAVTEMNSKMVCSK 325
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +2
Query: 50 SRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDA 214
S Y +YVGDL + ++ L + FS GP+ ++ V R+ G+A+V F+ P DA
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 215 EDAIRGLDGRTICGRRARVEMS 280
E A+ ++ + G+ R+ S
Sbjct: 87 ERAMDTMNFEALHGKPMRIMWS 108
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +2
Query: 20 ILFT*NSGIMSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFA----F 187
I+++ M R G I++ +L + D FS +G + + VA + GF+ F
Sbjct: 105 IMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGF 164
Query: 188 VEFEDPRDAEDAIRGLDGRTICGRRARV 271
V FE A++AI+ ++G + G++ V
Sbjct: 165 VHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 47 MSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFEDPRDA 214
M +Y +YV +L L+ F YG + + V + GF FV FE P +A
Sbjct: 311 MQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEA 370
Query: 215 EDAIRGLDGRTICGR 259
A+ ++ + +C +
Sbjct: 371 TSAVTEMNSKMVCSK 385
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 43.2 bits (97), Expect = 8e-05
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFEDPRDAEDAI 226
D +++ GDLGN S L AF Y + V R G+ FV F D D A+
Sbjct: 202 DFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAM 261
Query: 227 RGLDGRTICGRRARVEMS 280
R +DG+ + R ++ S
Sbjct: 262 REMDGKYVGNRPIKLRKS 279
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +2
Query: 59 GDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFEDPRDAEDA 223
G + + +L + +L F YG + +V + +R GF FV F + RDAE A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 224 IRGLDGRTICGRRARVEMS 280
+ DG+ + GR RV ++
Sbjct: 77 LDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +2
Query: 59 GDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFEDPRDAEDA 223
G + + +L + +L F YG + +V + +R GF FV F + RDAE A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 224 IRGLDGRTICGRRARVEMS 280
+ DG+ + GR RV ++
Sbjct: 77 LDRTDGKLVDGRELRVTLA 95
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRTI 250
+YVG++ + +L D FS YG + V + + +AFV +E A AI ++G+ +
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKT-QRYAFVRYEKKECATKAIMEMNGKEM 297
Query: 251 CGRRAR 268
G + R
Sbjct: 298 AGNQVR 303
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 59 GDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVA---RNPPGFAFVEFEDPRDAEDAIR 229
G +++V ++ +P+L F GP+ +V + R GF FV ++P DA+ A
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 230 GLDGRTICGRRARVEMS 280
+G TI GRR V ++
Sbjct: 158 EFNGTTIEGRRVEVNLA 174
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 59 GDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVA---RNPPGFAFVEFEDPRDAEDAIR 229
G +++V ++ +P+L F GP+ +V + R GF FV ++P DA+ A
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 230 GLDGRTICGRRARVEMS 280
+G TI GRR V ++
Sbjct: 158 EFNGTTIEGRRVEVNLA 174
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 39.9 bits (89), Expect = 8e-04
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 59 GDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVA---RNPPGFAFVEFEDPRDAEDAIR 229
G +++V ++ P+L+ F +G + +V + R GF FV E P+DAE A +
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 230 GLDGRTICGRRARV 271
L G I GR+ V
Sbjct: 211 ELHGSMIEGRKIEV 224
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 39.9 bits (89), Expect = 8e-04
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 59 GDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVA---RNPPGFAFVEFEDPRDAEDAIR 229
G +++V ++ P+L+ F +G + +V + R GF FV E P+DAE A +
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 230 GLDGRTICGRRARV 271
L G I GR+ V
Sbjct: 211 ELHGSMIEGRKIEV 224
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 39.9 bits (89), Expect = 8e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG-----FAFVEFEDPRDAEDAIRG 232
+IYVG + + L AF +GP++++ ++ +P FAFVE+E P A A
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 233 LDGRTICGRRARV 271
++G+ + GR +V
Sbjct: 163 MNGQMLGGRNLKV 175
Score = 31.9 bits (69), Expect = 0.21
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRG 232
++YV + + S+ +L+ F +G + +AR P GF ++EF + +AI G
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 233 LDGRTICGRRAR 268
++ + G+ R
Sbjct: 268 MNMFDLGGQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 39.9 bits (89), Expect = 8e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG-----FAFVEFEDPRDAEDAIRG 232
+IYVG + + L AF +GP++++ ++ +P FAFVE+E P A A
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 233 LDGRTICGRRARV 271
++G+ + GR +V
Sbjct: 163 MNGQMLGGRNLKV 175
Score = 33.5 bits (73), Expect = 0.068
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRG 232
++YV + + S+ +L+ F +G + +AR P GF ++EF + +AI G
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 233 LDGRTICGRRARV 271
++ + G+ RV
Sbjct: 268 MNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 39.9 bits (89), Expect = 8e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG-----FAFVEFEDPRDAEDAIRG 232
+IYVG + + L AF +GP++++ ++ +P FAFVE+E P A A
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 233 LDGRTICGRRARV 271
++G+ + GR +V
Sbjct: 163 MNGQMLGGRNLKV 175
Score = 33.5 bits (73), Expect = 0.068
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRG 232
++YV + + S+ +L+ F +G + +AR P GF ++EF + +AI G
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 233 LDGRTICGRRARV 271
++ + G+ RV
Sbjct: 268 MNMFDLGGQYLRV 280
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWV----ARNPPGFAFVEFEDPRDAEDAIRGLD 238
++VG + S+ +L F YG ++ + + A P G+AF+E+ D + A + D
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 239 GRTICGRRARVE 274
G + G+R V+
Sbjct: 166 GIKVDGKRLVVD 177
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAIRGL 235
+YVG+ ++ +L + FS G + NV + + P GFAFVEF + A+ A+
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 236 DGRTICGRRARVEMS 280
+G GR RV ++
Sbjct: 66 NGVDFNGRALRVNLA 80
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +2
Query: 44 IMSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFEDPR 208
I+ R D IYVG L S+ L + GP+ +V V N GF FVEF
Sbjct: 6 IVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEE 65
Query: 209 DAEDAIRGLDGRTICGRRARVEMSN 283
DA+ AI+ L+ + G+ +V ++
Sbjct: 66 DADYAIKILNMIKLYGKPIKVNKAS 90
Score = 33.5 bits (73), Expect = 0.068
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNV-WVARN-----PPGFAFVEFEDPRDAEDAIRG 232
I+VG+L + L D FS +G + V + R+ GFAF+ F ++ A+
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 233 LDGRTICGRRARV 271
++G+ +C R V
Sbjct: 162 MNGQFLCNRAITV 174
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +2
Query: 44 IMSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFEDPR 208
I+ R D IYVG L S+ L + GP+ +V V N GF FVEF
Sbjct: 16 IVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEE 75
Query: 209 DAEDAIRGLDGRTICGRRARVEMSN 283
DA+ AI+ L+ + G+ +V ++
Sbjct: 76 DADYAIKILNMIKLYGKPIKVNKAS 100
Score = 33.5 bits (73), Expect = 0.068
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNV-WVARN-----PPGFAFVEFEDPRDAEDAIRG 232
I+VG+L + L D FS +G + V + R+ GFAF+ F ++ A+
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 233 LDGRTICGRRARV 271
++G+ +C R V
Sbjct: 172 MNGQFLCNRAITV 184
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFEDPRDAEDAIRG 232
K+++G L ++ + +L + FS +GP+ + V R+P GF FV F AE A+
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 233 ----LDGRTICGRRA--RVEMSN 283
L G+T+ +RA R +MS+
Sbjct: 110 RPHKLGGKTVDSKRAIPREQMSS 132
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFEDPRDAEDAIRG 232
K+++G L ++ + +L + FS +GP+ + V R+P GF FV F AE A+
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 233 ----LDGRTICGRRA--RVEMSN 283
L G+T+ +RA R +MS+
Sbjct: 130 RPHKLGGKTVDSKRAIPREQMSS 152
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFEDPRDAEDAIRG 232
K+++G L ++ + +L + FS +GP+ + V R+P GF FV F AE A+
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 233 ----LDGRTICGRRA--RVEMSN 283
L G+T+ +RA R +MS+
Sbjct: 131 RPHKLGGKTVDSKRAIPREQMSS 153
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +2
Query: 20 ILFT*NSGIMSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFA----F 187
I+++ M R G I++ +L + D FS +G + + VA + GF+ F
Sbjct: 42 IMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGF 101
Query: 188 VEFEDPRDAEDAIRGLDGRTICGRRARV 271
V FE A++AI+ ++G + G++ V
Sbjct: 102 VHFETEEAAQNAIQKVNGMLLAGKKVFV 129
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 47 MSRYGDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFEDPRDA 214
M +Y +YV +L L+ F YG + + V + GF FV FE P +A
Sbjct: 248 MQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEA 307
Query: 215 EDAIRGLDGRTICGR 259
A+ ++ + +C +
Sbjct: 308 TSAVTEMNSKMVCSK 322
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRG 232
KI+VG L +N + + + +S +G + ++ V R+P GF FV F + + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 233 ----LDGRTICGRRA 265
+DG+T+ +RA
Sbjct: 84 RPHIIDGKTVDPKRA 98
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRG 232
KI+VG L +N + + + +S +G + ++ V R+P GF FV F + + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 233 ----LDGRTICGRRA 265
+DG+T+ +RA
Sbjct: 84 RPHIIDGKTVDPKRA 98
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRG 232
KI+VG L +N + + + +S +G + ++ V R+P GF FV F + + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 233 ----LDGRTICGRRA 265
+DG+T+ +RA
Sbjct: 84 RPHIIDGKTVDPKRA 98
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 37.5 bits (83), Expect = 0.004
Identities = 18/73 (24%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFEDPRDAEDAIRGL 235
++V ++ A++ ++ D FS YG ++N+ + + G+A VE+E ++A +AI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 236 DGRTICGRRARVE 274
+ + G+ +V+
Sbjct: 117 NDTDLLGQNVKVD 129
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 37.1 bits (82), Expect = 0.005
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAIRGL 235
++VGDL + +L +AF +G + + V R+ G+ FV + +AE AI +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 236 DGRTICGRR 262
+G+ + GRR
Sbjct: 84 NGQWL-GRR 91
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.005
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAIRGL 235
++VGDL + +L +AF +G + + V R+ G+ FV + +AE AI +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 236 DGRTICGRR 262
+G+ + GRR
Sbjct: 94 NGQWL-GRR 101
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 37.1 bits (82), Expect = 0.005
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAIRGL 235
++VGDL + +L +AF +G + + V R+ G+ FV + +AE AI +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 236 DGRTICGRR 262
+G+ + GRR
Sbjct: 197 NGQWL-GRR 204
Score = 32.7 bits (71), Expect = 0.12
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFEDPRDAEDAIRGLDG 241
+YVG+L + ++ + F+ G + V N P +AFVEF D A A++ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDP-YAFVEFSDHGQASQALQTMNK 106
Query: 242 RTICGRRARV 271
R + R +V
Sbjct: 107 RLLLDREMKV 116
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 37.1 bits (82), Expect = 0.005
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAIRGL 235
++VGDL + +L +AF +G + + V R+ G+ FV + +AE AI +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 236 DGRTICGRR 262
+G+ + GRR
Sbjct: 165 NGQWL-GRR 172
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRTI 250
+YVG++ N + E+ AF +GP+ V + G+AFV+FE A AI ++ I
Sbjct: 258 VYVGNIAN-LGEDEIRRAFDRFGPINEVRTFKIQ-GYAFVKFETKESAARAIVQMNNADI 315
Query: 251 CGRRAR 268
G+ R
Sbjct: 316 GGQIVR 321
Score = 33.5 bits (73), Expect = 0.068
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAIRGL 235
++VGDL + +L +AF +G + + R+ G+ FV + DAE AI +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 236 DGRTICGRR 262
+G + GRR
Sbjct: 194 NGAWL-GRR 201
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.3 bits (80), Expect = 0.010
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 65 CKIYVGDLGNNASKPELEDAFSYYGPLRNVWVA-----RNPPGFAFVEFEDPRDAEDAIR 229
C +YVG+L + ++ + F G +R V + + P GF FVE+ DAE A++
Sbjct: 37 CTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQ 96
Query: 230 GLDGRTICGRRARVE 274
+ + R R +
Sbjct: 97 NISNTRMDDRVIRAD 111
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 35.5 bits (78), Expect = 0.017
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 356 CYDCGDRGHYARDC 397
CY+CG RGHY+RDC
Sbjct: 69 CYNCGGRGHYSRDC 82
Score = 29.5 bits (63), Expect = 1.1
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 356 CYDCGDRGHYARDC 397
CY+C + GH++RDC
Sbjct: 37 CYNCQETGHFSRDC 50
Score = 27.9 bits (59), Expect = 3.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 356 CYDCGDRGHYARDC 397
CY+CG GH +R+C
Sbjct: 109 CYNCGRSGHISREC 122
Score = 27.5 bits (58), Expect = 4.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 356 CYDCGDRGHYARDC 397
CY C + GH +RDC
Sbjct: 133 CYQCQETGHISRDC 146
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 35.1 bits (77), Expect = 0.022
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFEDPRDAEDAIRGL 235
+YVG++ A+ E+E F G + V + + +P GFA+VEF + ++A+
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMT 139
Query: 236 DGRTICGRRARVE 274
D + GR+ +V+
Sbjct: 140 DS-LLRGRQIKVD 151
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 35.1 bits (77), Expect = 0.022
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +2
Query: 77 VGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAIRGLD 238
V +L ++ EL D F G + +++AR+ P GFAFV FE DA AI L+
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 35.1 bits (77), Expect = 0.022
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 125 FSYYGPLRNVWVA---RNPPGFAFVEFEDPRDAEDAIRGLDGRTICGRRARVEMS 280
F GP+ +V + R GF FV ++P DA+ A +G TI GRR V ++
Sbjct: 2 FEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 35.1 bits (77), Expect = 0.022
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAIRGL 235
IY+G L S+ ++ FS YG + N+ + R+ GFAF+ ++D R A+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 236 DGRTICGRRARVE 274
+G ++ R RV+
Sbjct: 100 NGISLHKRMIRVD 112
>AC024793-5|AAF60689.1| 79|Caenorhabditis elegans Hypothetical
protein Y48G1BL.4 protein.
Length = 79
Score = 35.1 bits (77), Expect = 0.022
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAI 226
++Y+G N AS + E F YG L + + +N G +F+D DA+D I
Sbjct: 3 RVYIGRFPNRASDRDAEHFFCDYGKLPDA-IMKNVFGVGCKDFQDQSDADDII 54
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 34.7 bits (76), Expect = 0.029
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 59 GDCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFV 190
G C+++VG+L N + EL++ FS +G + +++ GFAF+
Sbjct: 114 GRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGK--GFAFL 155
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.051
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG-----FAFVEFEDPRDAEDAIRGL 235
++V L + +LE FS +G + N + R+ +AF+EF++ + E A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 236 DGRTICGRRARVEMS 280
D I RR V+ S
Sbjct: 303 DNVLIDDRRIHVDFS 317
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.051
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG-----FAFVEFEDPRDAEDAIRGL 235
++V L + +LE FS +G + N + R+ +AF+EF++ + E A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 236 DGRTICGRRARVEMS 280
D I RR V+ S
Sbjct: 303 DNVLIDDRRIHVDFS 317
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 33.9 bits (74), Expect = 0.051
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG-----FAFVEFEDPRDAEDAIRGL 235
++V L + +LE FS +G + N + R+ +AF+EF++ + E A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 236 DGRTICGRRARVEMS 280
D I RR V+ S
Sbjct: 234 DNVLIDDRRIHVDFS 248
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 33.9 bits (74), Expect = 0.051
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRG 232
K+++G L + L D F +G + V R+P GF F+ F DP + +
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 233 ----LDGRTI 250
LDG+ I
Sbjct: 106 REHELDGKKI 115
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 33.9 bits (74), Expect = 0.051
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 104 KPELEDAFSYYGPLRNVWV-ARNPPGFAFVEFEDPRDAEDAIRGLDGRTICGRRARVEM 277
K E+ + YG ++ V V A +P G V F +++ A++ L GR + GR+ E+
Sbjct: 335 KEEMTQSCQKYGIVKKVVVYANHPDGVVSVTFPTTEESDMAVKYLHGRVVDGRKLTAEL 393
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 33.9 bits (74), Expect = 0.051
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRG 232
K+++G L + L D F +G + V R+P GF F+ F DP + +
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 233 ----LDGRTI 250
LDG+ I
Sbjct: 106 REHELDGKKI 115
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 33.1 bits (72), Expect = 0.089
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP--GFAFVEFEDPRDAEDAIRGLDGR 244
+Y+ +L + E+ + F +G +R + V G AFV +ED DA+ A L G
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTACEHLSGY 80
Query: 245 TICGR 259
+ R
Sbjct: 81 NVSNR 85
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 32.7 bits (71), Expect = 0.12
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARN----PPGFAFVEFEDPRDAEDAIRGL 235
K++V ++ A+ EL+ FS +G + +V + P G AFV+F+ A+ +
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVASG 743
Query: 236 DGRTICGRRARVEMSN 283
D + R V +SN
Sbjct: 744 DKLMLRERELEVALSN 759
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 32.3 bits (70), Expect = 0.16
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFE 199
++ +L ++A+ LE F+ + L+++ + N PG AFVEF+
Sbjct: 134 LFCTNLPDSATAEMLEIMFNQFAGLKDIRMVPNRPGIAFVEFD 176
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFEDPRDAEDAIRGL 235
+Y+ L N + L + S YG + + N G+ FV+FE P+ A A+ GL
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGL 168
Query: 236 DGRTICGRRARVE 274
+ + + A+++
Sbjct: 169 NTEGVQAQMAKLQ 181
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFEDPRDAEDAIRGL 235
+Y+ L N + L + S YG + + N G+ FV+FE P+ A A+ GL
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGL 142
Query: 236 DGRTICGRRARVE 274
+ + + A+++
Sbjct: 143 NTEGVQAQMAKLQ 155
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 30.7 bits (66), Expect = 0.48
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 356 CYDCGDRGHYARDC 397
CY CG++GHYA C
Sbjct: 252 CYKCGEKGHYANRC 265
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 30.7 bits (66), Expect = 0.48
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAI 226
D KI+VG + + +L F+ YG + V + GFAFVEF + A+
Sbjct: 28 DKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLAL 87
Query: 227 RGLDGRTICGRRARVE 274
+ +TI G+ V+
Sbjct: 88 AARE-QTIKGKSVEVK 102
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 30.7 bits (66), Expect = 0.48
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAI 226
D KI+VG + + +L F+ YG + V + GFAFVEF + A+
Sbjct: 28 DKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLAL 87
Query: 227 RGLDGRTICGRRARVE 274
+ +TI G+ V+
Sbjct: 88 AARE-QTIKGKSVEVK 102
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.9 bits (64), Expect = 0.83
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRG 232
++++ +L + +L+ F YG + V V + GFA VEF P A A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 233 LDGRTICGRRARV 271
LDG GR +
Sbjct: 340 LDGYVFKGRMMHI 352
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 176 GFAFVEFEDPRDAEDAIRGLDGRTICGRRARVEMSN 283
GF FV+F DA+ A++ + G + G +++S+
Sbjct: 690 GFGFVQFYTAFDAKTALKDMQGELLDGHSLELKISH 725
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 29.9 bits (64), Expect = 0.83
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLD 238
++ ++ +++ FS + LR V N FAF+E+E +E A + LD
Sbjct: 145 LFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPARQALD 200
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRGL 235
+YVG + ++ L AF +G + + + + GF FVEF+ DA AI +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 236 DGRTICGRRARVEMS 280
+ + G+ RV +
Sbjct: 73 NESELFGKTIRVNFA 87
>Z78417-9|CAI70407.1| 700|Caenorhabditis elegans Hypothetical
protein C35C5.11 protein.
Length = 700
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 220 VLSVTRIFKFYKSETGW--ISGHPYISQRTIVRKCIFKFWLAGVVSQIANIDFA 65
+L VTR K Y++ TGW ++ + + R +F W A I + +FA
Sbjct: 373 LLEVTRALKAYQNLTGWRPVTFTLVLKMGFLTRSILFAHWDAEEYGLIGSTEFA 426
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 28.7 bits (61), Expect = 1.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 356 CYDCGDRGHYARDC 397
C +CG GH+A+DC
Sbjct: 641 CRNCGQEGHFAKDC 654
Score = 26.6 bits (56), Expect = 7.8
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +2
Query: 356 CYDCGDRGHYARDC 397
C++CG+ GH +++C
Sbjct: 572 CHNCGEEGHISKEC 585
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 28.7 bits (61), Expect = 1.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 356 CYDCGDRGHYARDC 397
C +CG GH+A+DC
Sbjct: 641 CRNCGQEGHFAKDC 654
Score = 26.6 bits (56), Expect = 7.8
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +2
Query: 356 CYDCGDRGHYARDC 397
C++CG+ GH +++C
Sbjct: 572 CHNCGEEGHISKEC 585
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFEDPRDAEDAI 226
+++G++ N++ E+E+ F G + + ++ FA++EF+D E+A+
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 164 RNPPGFAFVEFEDPRDAEDAIRGLDG 241
R+ +A+V FE P DA+ AI +DG
Sbjct: 60 RHMSDYAYVTFETPEDAQKAINLVDG 85
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 27.9 bits (59), Expect = 3.4
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +2
Query: 68 KIYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRDAEDAIRG 232
+IYVG + + + L F G + ++ + +P G+AFV + + DA A +
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 233 LDGRTI-CGRRARVEMS 280
DG I G+ +V +S
Sbjct: 261 YDGHEISTGKPLKVNVS 277
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -2
Query: 407 AFESNRVHNALCHHNHSSGHHMDVVVAETAAEDHGRHNLVHH*T 276
A + H HH H G H + H RH+ HH T
Sbjct: 369 AHHEHHEHKDGAHHEHKEGEHHEHAAHHDEHGVHHRHHGEHHGT 412
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 386 HNALCHHNHSSGHHMDVVVAETAAEDHGRHNLVHH 282
H++L HH H GH + A HG H HH
Sbjct: 661 HHSLAHHGHHGGHGTHHGAHHSPAH-HGHHG-AHH 693
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 27.9 bits (59), Expect = 3.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 356 CYDCGDRGHYARDC 397
CY CG RGH A +C
Sbjct: 411 CYYCGKRGHTANEC 424
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 176 GFAFVEFEDPRDAEDAIRGLDGRTICGRRARV 271
GFA+V FE+ + AI GL+G R +V
Sbjct: 54 GFAYVTFENEQQMNTAISGLNGADFGNRVLKV 85
>Z81034-5|CAB02730.1| 198|Caenorhabditis elegans Hypothetical
protein C15C6.4 protein.
Length = 198
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +2
Query: 86 LGNNASKPELEDAF---SYYGPLRNVWVARNP 172
LGN+ S ++E Y+G L +W+A NP
Sbjct: 80 LGNHFSSTKIEKTILKSDYHGALLTIWLAENP 111
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRN 151
+ KI DL + S P++ YYGP+R+
Sbjct: 750 EAKISSADLRPSRSNPDITSISQYYGPVRS 779
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRN 151
+ KI DL + S P++ YYGP+R+
Sbjct: 750 EAKISSADLRPSRSNPDITSISQYYGPVRS 779
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRN 151
+ KI DL + S P++ YYGP+R+
Sbjct: 750 EAKISSADLRPSRSNPDITSISQYYGPVRS 779
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRN 151
+ KI DL + S P++ YYGP+R+
Sbjct: 750 EAKISSADLRPSRSNPDITSISQYYGPVRS 779
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFEDPRDAEDAI 226
+++G++ N++ E+E+ F G + + ++ FA++EF+D E+A+
Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRN 151
+ KI DL + S P++ YYGP+R+
Sbjct: 627 EAKISSADLRPSRSNPDITSISQYYGPVRS 656
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRN 151
+ KI DL + S P++ YYGP+R+
Sbjct: 750 EAKISSADLRPSRSNPDITSISQYYGPVRS 779
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRN 151
+ KI DL + S P++ YYGP+R+
Sbjct: 750 EAKISSADLRPSRSNPDITSISQYYGPVRS 779
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 62 DCKIYVGDLGNNASKPELEDAFSYYGPLRN 151
+ KI DL + S P++ YYGP+R+
Sbjct: 750 EAKISSADLRPSRSNPDITSISQYYGPVRS 779
>Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical
protein C56A3.7 protein.
Length = 351
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 371 HHNHSSGHHMDVVVAE-TAAEDHGRHNLVHH*TSLRE 264
HH+H HH +A+ E+ VHH TSL +
Sbjct: 41 HHHHHEHHHQHQGIAQYDTVEEVETLETVHHRTSLNQ 77
>U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2
protein.
Length = 351
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 371 HHNHSSGHHMDVVVAE-TAAEDHGRHNLVHH*TSLRE 264
HH+H HH +A+ E+ VHH TSL +
Sbjct: 41 HHHHHEHHHQHQGIAQYDTVEEVETLETVHHRTSLNQ 77
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +2
Query: 71 IYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRDAEDAIRGL 235
+YVG++ ++ E+E+ F+ G + V + ++ FAFVEF+ + A+ L
Sbjct: 48 VYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL-VL 106
Query: 236 DGRTICGRRARVEM 277
G R+ V +
Sbjct: 107 SGTMFRNRKIMVTL 120
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 371 HHNHSSGHHMDVVVAETAAEDHGRHNL 291
H NH S H VV +++ +D +H L
Sbjct: 1493 HSNHGSAHSQQPVVLKSSMDDEEQHML 1519
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 371 HHNHSSGHHMDVVVAETAAEDHGRHNL 291
H NH S H VV +++ +D +H L
Sbjct: 1493 HSNHGSAHSQQPVVLKSSMDDEEQHML 1519
>Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 166 SGHPYISQRTIVRKCIFKFWLAGVVSQIANIDFAVA 59
+GHP + + + R C FWLAG+ + ++ + +A
Sbjct: 278 NGHPGLDVKNL-RACALDFWLAGMETTSNSLRWHIA 312
>Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 166 SGHPYISQRTIVRKCIFKFWLAGVVSQIANIDFAVA 59
+GHP + + + R C FWLAG+ + ++ + +A
Sbjct: 278 NGHPGLDVKNL-RACALDFWLAGMETTSNSLRWHIA 312
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/60 (23%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 68 KIYVGDLGNNA-SKPELEDAFSYYGPLRNV-WVARNPPGFAFVEFEDPRDAEDAIRGLDG 241
++++G++ ++ ++ + F +G + V + A+ GF FV+F + A+++ R L+G
Sbjct: 84 RVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQ--GFGFVQFNEAGSADESCRSLNG 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,369,494
Number of Sequences: 27780
Number of extensions: 179638
Number of successful extensions: 794
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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