Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D23
(566 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 24 1.0
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 24 1.0
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 23 1.8
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 3.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 3.2
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 22 3.2
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 22 3.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 3.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 3.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 3.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 3.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 3.2
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 4.2
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 4.2
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 7.3
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 7.3
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 439 GQLLFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
G +FV +GK + +EV +E K+Q
Sbjct: 76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 107
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 439 GQLLFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
G +FV +GK + +EV +E K+Q
Sbjct: 152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 183
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 439 GQLLFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
G +FV +GK + +EV +E K+Q
Sbjct: 228 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 259
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 439 GQLLFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
G +FV +GK + +EV +E K+Q
Sbjct: 304 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 335
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 439 GQLLFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
G +FV +GK + +EV +E K+Q
Sbjct: 380 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 411
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 439 GQLLFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
G +FV +GK + +EV +E K+Q
Sbjct: 456 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 487
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 439 GQLLFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
G +FV +GK + +EV +E K+Q
Sbjct: 532 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 563
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 439 GQLLFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
G +FV +GK + +EV +E K+Q
Sbjct: 608 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 639
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 430 LFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
+FV +GK + +EV +E K+Q
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQ 31
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 439 GQLLFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
G +FV +GK + +EV +E K+Q
Sbjct: 48 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 79
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 233 GRHRLA*GPCAEDSTSEIQVSGAPRGGDRPT 141
G H + P E S ++Q S P+ G PT
Sbjct: 159 GYHPSSSYPANEISCPQVQWSATPQAGSTPT 189
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 252 APSSLTWSTSTVKAAASTQKTLERGRSS 335
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 252 APSSLTWSTSTVKAAASTQKTLERGRSS 335
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 430 LFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
+FV +GK + +EV +E K+Q
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQ 31
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 430 LFVGRRSGKYLRIEVISESLVEGTNVKVQ 344
+FV +GK + +EV +E K+Q
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQ 31
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 252 APSSLTWSTSTVKAAASTQKTLERGRSS 335
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 252 APSSLTWSTSTVKAAASTQKTLERGRSS 335
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 252 APSSLTWSTSTVKAAASTQKTLERGRSS 335
+P+S T STS+ + A + + G+SS
Sbjct: 124 SPASSTSSTSSTEKAGTNNNNSKSGQSS 151
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 252 APSSLTWSTSTVKAAASTQKTLERGRSS 335
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 252 APSSLTWSTSTVKAAASTQKTLERGRSS 335
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 275 NKYGKGSSLYPEDARARALV 334
N +G + L+P+DA RA +
Sbjct: 3 NDHGSNTHLHPDDAIRRAKI 22
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 275 NKYGKGSSLYPEDARARALV 334
N +G + L+P+DA RA +
Sbjct: 3 NDHGSNTHLHPDDAIRRAKI 22
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 124 PQSQLKVGRSPPRGAP 171
PQ Q +V R PP +P
Sbjct: 108 PQIQTQVARPPPARSP 123
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 124 PQSQLKVGRSPPRGAP 171
PQ Q +V R PP +P
Sbjct: 108 PQIQTQVARPPPARSP 123
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,329
Number of Sequences: 336
Number of extensions: 2359
Number of successful extensions: 24
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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