Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D23
(566 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 55 5e-08
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 54 1e-07
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 53 1e-07
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 52 2e-07
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 47 9e-06
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 47 1e-05
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 46 2e-05
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 44 8e-05
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 44 1e-04
03_01_0249 - 1935355-1935827,1936129-1936330 44 1e-04
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 42 3e-04
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 42 3e-04
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 41 8e-04
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 40 0.001
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 40 0.001
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 40 0.002
08_02_1570 + 27931057-27931367,27931486-27931550,27931763-279318... 38 0.004
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 36 0.017
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 35 0.039
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 35 0.039
05_04_0304 - 20048518-20049003,20049074-20049412 34 0.069
10_08_0807 - 20712066-20712290,20712750-20713339,20713415-207134... 34 0.091
10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041 31 0.48
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 31 0.85
02_03_0231 - 16636377-16636403,16636590-16636645,16636793-166368... 31 0.85
07_03_0849 + 21997758-21998423 29 2.0
03_02_0739 + 10834581-10835927 29 2.0
11_01_0017 - 129261-129335,129352-129426,129565-129645,129929-13... 29 3.4
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 28 6.0
02_04_0185 - 20748206-20748405,20749067-20749232,20749373-207494... 28 6.0
01_01_1167 - 9301114-9301490,9302251-9302808,9303054-9303093 28 6.0
12_01_0668 - 5682664-5682916,5684542-5684576,5684643-5684693,568... 27 7.9
07_03_1162 + 24437396-24438652 27 7.9
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 54.8 bits (126), Expect = 5e-08
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Frame = +2
Query: 161 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 340
GEH P+ L NP VP L D L +WESRAI Y+ K K L D + A+VD
Sbjct: 39 GEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRK-NKPELLKDGDLKESAMVDV 97
Query: 341 RLYFDIGTLYQRFGDYFY-----PQVFAGAPADK---EKLAKIEDALQLLDKFLDGQKYA 496
L + + P +F P +K E L K++ L++ + L KY
Sbjct: 98 WLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYL 157
Query: 497 AG 502
AG
Sbjct: 158 AG 159
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = +2
Query: 161 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD- 337
GEH +P + NP VP D L+++ESRAI Y++ K+G L + A+VD
Sbjct: 39 GEHKRPPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHG-SDLLRESNLSESAMVDV 97
Query: 338 ----QRLYFDIGTLYQRFGDYFYPQVFAGAPAD----KEKLAKIEDALQLLDKFLDGQKY 493
+ +FD G + F +F G D E L K++ AL++ + L KY
Sbjct: 98 WLEVESSHFD-GAMSPIIFQCFIVPMFMGGATDIGVVNESLEKLKKALEVYEAQLSKSKY 156
Query: 494 AAG 502
AG
Sbjct: 157 LAG 159
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 53.2 bits (122), Expect = 1e-07
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Frame = +2
Query: 161 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALV 334
GE PE ++ NP +P L D L ++ESRAI Y++ KY K L D R ALV
Sbjct: 39 GEQNSPEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDIREAALV 98
Query: 335 DQRLYFDIGTLYQRFGDYFYP----QVFAGAPADK----EKLAKIEDALQLLDKFLDGQK 490
D + Y + + G P ++ E L K++ L+ + L G +
Sbjct: 99 DVWTEVEAHQYYPALSPIVFECIIFPIMRGVPTNQQVVHESLEKLKKVLETYEARLSGSR 158
Query: 491 YAAG 502
Y AG
Sbjct: 159 YLAG 162
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +2
Query: 161 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 331
GEH PEF+K+NP VP LVD I +S AI YL +KY + L P+D + +AL
Sbjct: 49 GEHSDPEFMKVNPMKFVPALVDGDAVIGDSYAIALYLEDKYPE-HPLLPQDLKMKAL 104
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 47.2 bits (107), Expect = 9e-06
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Frame = +2
Query: 167 HLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY-GKGSSLYPEDARARALVDQR 343
H +P FL LNP +P L D ++ESRAI Y+ KY +G+ L P +A + A ++
Sbjct: 45 HKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGADLLPAEA-SPAKLEVW 103
Query: 344 LYFDIGTLYQRFGDYFY----PQVFAGA---PADKEKLAKIEDALQLLDKFLDGQKYAAG 502
L + Y + + GA A E A + L + D L G +Y AG
Sbjct: 104 LEVESHHFYPAISGLVFQLLIKPLLGGATDTAAVDEHAAALAQVLDVYDAHLAGSRYLAG 163
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Frame = +2
Query: 164 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALVD 337
EH PE LK NP +P D L ++ESRA+ Y++ KY + + L + A+VD
Sbjct: 40 EHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTEAAMVD 99
Query: 338 QRLYFDIGTLYQRFGDYFYPQVF----AGAPADKE----KLAKIEDALQLLDKFLDGQKY 493
+ +I Y Y +F G P +++ L K++ L++ + L Y
Sbjct: 100 IGIEVEIHQYYPVISSIVYECLFNPAMYGVPTNQKVVDNSLEKLKKVLEVYEARLSQNTY 159
Query: 494 AAG 502
AG
Sbjct: 160 LAG 162
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Frame = +2
Query: 161 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY-------GKGSSLYPEDAR 319
G+H +PE L NP +P L D L++++SRAI Y+ KY G+G SL E A
Sbjct: 39 GDHRRPEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSL-EESAM 97
Query: 320 ARALVDQRLYFDIGTLYQRFGDYFYPQVFAGAPADK----EKLAKIEDALQLLDKFLDGQ 487
+D + + + F G D+ E + K+E L + + L G
Sbjct: 98 VDVWLDVEAHQHEAAVRPILWHCIINK-FEGRDRDQGVVDESVRKLEKVLGVYEARLSGS 156
Query: 488 KYAAG 502
+Y AG
Sbjct: 157 RYLAG 161
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2
Query: 176 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRL 346
P++ K+NP VP LVD +I +S AII YL +KY + L P+D + +AL Q L
Sbjct: 44 PDYGKINPIKYVPALVDGDFTISDSLAIILYLEDKYPQ-HPLLPQDLKKKALNMQGL 99
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Frame = +2
Query: 176 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYFD 355
P++ K+NP +P LVD L + +S AI YL +KY + +L P+D + +AL + ++
Sbjct: 42 PDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKYPQ-HALLPKDLKKKAL-NLQIANI 99
Query: 356 IGTLYQRFGDYFYPQVFAGAPADKEKLA----KIEDALQLLDKFLDGQ--KYAAG 502
+ + Q Y + G + E L I+ + ++K L+G KYA G
Sbjct: 100 VCSSIQPLQGYAVIGLHEGKLSPDESLQIVQHYIDKGFKAIEKLLEGSNFKYATG 154
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Frame = +2
Query: 161 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSL----YPED-ARAR 325
GEH P FLKL P VP D +++ESRAI Y+ ++Y + ED A R
Sbjct: 40 GEHKSPSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSGNKTLMGRKEDGAVGR 99
Query: 326 ALVDQRL-----YFDIGTLYQRFGDYFYPQVFAGAPAD----KEKLAKIEDALQLLDKFL 478
A +++ + F+ +L F F P F G D ++ AK+ L + +++L
Sbjct: 100 AAIEKWIEAEGQSFNPPSLAMAFQLAFAP--FMGRATDMAVVEQNEAKLVKVLDVYEQWL 157
Query: 479 DGQKYAAG 502
+Y AG
Sbjct: 158 GENQYFAG 165
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 164 EHLKPEFLKLNPQHTVPTLVD-DGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 331
E PEF KLNP VP LVD D + +S AI+ YL + Y + L P+D + +AL
Sbjct: 62 EQSHPEFEKLNPMKYVPALVDGDDTVVVDSFAILLYLEDTYPQ-HPLLPQDPKMKAL 117
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 164 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALVD 337
EH PE LK NP +P D L ++ESRAI Y++ KY + L + R A+VD
Sbjct: 40 EHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVD 99
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 40.7 bits (91), Expect = 8e-04
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Frame = +2
Query: 164 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALVD 337
EH PEF+KL T ++ +SRAI YL ++ ++Y + RA ++
Sbjct: 41 EHKLPEFIKLRDPTGQVTFKHGDKTLVDSRAICRYLSTQFPDDGNRTIYGTGSLERASIE 100
Query: 338 QRLY-----FDIGTLYQRFGDYFYPQVFAGAPADKEKLA----KIEDALQLLDKFLDGQK 490
Q L FD + F F PQ+ PAD+ ++A K++ L + D+ L K
Sbjct: 101 QWLQAEAQSFDAPSSELVFHLAFAPQL--NIPADEARIAENERKLQQMLNVYDEILAKNK 158
Query: 491 YAAG 502
Y AG
Sbjct: 159 YLAG 162
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 155 HHGEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGK--GSSLYPEDARARA 328
+ G P++LKL P T DD L++ ESR I+ ++ +KY + L A RA
Sbjct: 39 YRGTQRMPQYLKLQPLGEALTFEDDNLTLSESRGILRHIAHKYARQGNPDLIGTGALERA 98
Query: 329 LVDQRL 346
++Q L
Sbjct: 99 SIEQWL 104
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 39.9 bits (89), Expect = 0.001
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Frame = +2
Query: 164 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQR 343
EH PE NP VP L D L ++ESRAI Y++ K L + A VD
Sbjct: 39 EHKSPEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK-NNSELLKEHNLSDAAKVDVW 97
Query: 344 L-----YFDIGTLYQRFGDYFYPQVFAG---APADKEKLAKIEDALQLLDKFLDGQKYAA 499
L +FD + P F G A +E L K++ Q+ ++ L +Y A
Sbjct: 98 LEAESHHFDEPMSVVIYQCLILPVYFGGQTDAKVVEENLEKLKKTFQVYEERLCKFRYLA 157
Query: 500 G 502
G
Sbjct: 158 G 158
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Frame = +2
Query: 176 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYFD 355
PEFLK+NP +P L +++ES AI Y V + SSL + ++Q + F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARY-VARLKDNSSLCGSSLIDYSHIEQWMDFS 125
Query: 356 IGTLYQRFGDYFYPQVFAG--APADKE-KLAKIEDALQLLDKFLDGQKYAAG 502
+ G + YP++ G P +E + ++ +L L+ L Y G
Sbjct: 126 ATEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYLVG 177
>08_02_1570 +
27931057-27931367,27931486-27931550,27931763-27931841,
27931992-27932010,27932091-27932210,27932557-27932626,
27932709-27932752,27932918-27932959,27933033-27933092,
27933413-27933470,27934718-27935376
Length = 508
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +2
Query: 158 HGEHLKPEFLKLNPQHTVPTLVDD--GLSIWESRAIITYLVNKYGKGS 295
+G +P+ L++ + P +VD G++++ES AII YL +KYG G+
Sbjct: 178 NGPTFRPKVLEMGGKQQFPYMVDPNTGVAMYESDAIIKYLADKYGDGT 225
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 36.3 bits (80), Expect = 0.017
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Frame = +2
Query: 161 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQ 340
GE+ L +P +P D ++++ESRAI Y++ Y K L + A+VD
Sbjct: 38 GENRSRHHLARSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEESAMVDM 97
Query: 341 RL-----YFDIGTLYQRFGDYFYPQVFAGAPAD---KEKLAKIEDALQLLDKFLDGQKYA 496
+ ++D + P + GA E + K+ L++ ++ L +Y
Sbjct: 98 WMEVEAHHYDPAIFHIIRECVIKPMIGGGARDQAIVDENVEKLRKVLEVYERRLSESEYL 157
Query: 497 AG 502
AG
Sbjct: 158 AG 159
>11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 35.1 bits (77), Expect = 0.039
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 164 EHLKPEFLKLNPQHTVPTLVDDGLSIWE 247
EHL PEF K+NP VP +VD ++E
Sbjct: 41 EHLSPEFKKINPMGQVPAIVDGRFRLFE 68
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 35.1 bits (77), Expect = 0.039
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Frame = +2
Query: 176 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYL--------VNKYGKGSSLYPEDARARAL 331
PEFLK+NP +P L ++ES AI Y+ V + + LY A
Sbjct: 43 PEFLKMNPIGKIPVLETPDGPVFESNAIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAH 102
Query: 332 VDQRLYFDIGTLYQRFGDYFYPQVFAG---APADKEKLAKIEDALQLLDKFLDGQKYAAG 502
++Q F + G + YP++ A +++ +A ++ +L L+ L Y G
Sbjct: 103 IEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVG 162
Score = 35.1 bits (77), Expect = 0.039
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Frame = +2
Query: 176 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYL--------VNKYGKGSSLYPEDARARAL 331
PE+LK+NP VP L ++ES AI Y+ V + + LY A
Sbjct: 604 PEYLKMNPIGKVPILETPDGPVFESNAIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAH 663
Query: 332 VDQRLYFDIGTLYQRFGDYFYPQV-FAG--APADKEKLAKIEDALQLLDKFLDGQKYAAG 502
++Q + F + G + +P++ FA A +++ +A ++ +L L+ L Y G
Sbjct: 664 IEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVG 723
>05_04_0304 - 20048518-20049003,20049074-20049412
Length = 274
Score = 34.3 bits (75), Expect = 0.069
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 185 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 331
L+LNP H VP LV G + ES I+ YL + + + L P D RAL
Sbjct: 53 LRLNPVHKKVPVLVHRGRPLAESVIILQYLDDAWPESRPLLPSDPFDRAL 102
>10_08_0807 -
20712066-20712290,20712750-20713339,20713415-20713463,
20713669-20713821
Length = 338
Score = 33.9 bits (74), Expect = 0.091
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 161 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 283
G P++LKL P T D +++ ESR II ++ +KY
Sbjct: 40 GSKRMPQYLKLQPHGEALTFEDGNVTLVESRKIIRHIADKY 80
>10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041
Length = 279
Score = 31.5 bits (68), Expect = 0.48
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 185 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPED 313
L NP H VP L+ +G I ESR I+ Y++++ G++L P D
Sbjct: 67 LASNPVHKKVPVLIHNGKPICESRIILEYIIDEVFPVDGAALLPAD 112
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 30.7 bits (66), Expect = 0.85
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 400 LRIEVISESLV-EGTNVKVQALIDERPRSSVFWVEAAAFTVLVDQ 269
L++ ++S V EG N VQAL +ER W + AA VD+
Sbjct: 509 LQVLAAADSTVREGLNANVQALAEERAALEAEWAQLAADRARVDE 553
>02_03_0231 -
16636377-16636403,16636590-16636645,16636793-16636853,
16637590-16637649,16638007-16638096,16638775-16638906,
16639016-16639293,16639916-16639949,16640036-16640105,
16641170-16641282,16641654-16641836,16642106-16642283,
16642958-16643142,16643347-16643477,16643620-16643772,
16643849-16643995,16644662-16644737
Length = 657
Score = 30.7 bits (66), Expect = 0.85
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = +3
Query: 249 RAPSSLTWSTSTVKAAASTQKTLERGRSSISACTLTLVPSTRDSEITSIRKYLPERLPTK 428
+ PSS + S+ +ST T ER +S AC L PS+ ++S + L P
Sbjct: 459 KVPSSGEYVNSSQGPGSSTSSTSERIAASSVACAPGLSPSSSMGSLSSEKSSLN---PNA 515
Query: 429 RSWPRSRTLSSFWTNSSMVKSTQP 500
+ + + SF T S+ V+ QP
Sbjct: 516 KEFKLNPNAKSF-TPSTSVRPPQP 538
>07_03_0849 + 21997758-21998423
Length = 221
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 270 WSTSTVKAAASTQKTLERGR-SSISACTLTLVPSTRDSEITSIRKYLPERLPTKRSWPRS 446
WS+S+V ++++ +L+ R SS S+ T T P +R ++S+ L P R P
Sbjct: 73 WSSSSVPWSSTSALSLDSARSSSSSSSTTTTAPCSRSRSLSSLSDALSP--PAARRAPER 130
Query: 447 R 449
R
Sbjct: 131 R 131
>03_02_0739 + 10834581-10835927
Length = 448
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -1
Query: 527 LSQLGSD*GRLRTFDHRGICPKAGERPRSWPASLCRQALRQI--LADRSNLRISGRGYQC 354
L + G D GR H C S+PA CR+ + + AD L++ G ++
Sbjct: 351 LRRAGRDDGRWPFVTHFVGCKPCRRYADSYPAERCRRGMERAFNFADDQILKLYGFAHES 410
Query: 353 QSTSADRR 330
+T+A RR
Sbjct: 411 LNTTAVRR 418
>11_01_0017 -
129261-129335,129352-129426,129565-129645,129929-130040,
130131-131177,131256-131347,131773-131943,132150-132253,
132367-132501,132583-132724,132803-133059,133126-133337,
133417-133454
Length = 846
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 288 KAAASTQKTLERGRSSISACTLTLVPSTRDSEITSIRKYLPERLPTKRSWPRSRTLSS 461
K + + + R RS+ S+ T P+TR + +TS R + E LP + RS + S
Sbjct: 231 KKSEPSPSVVSRSRST-SSVTNVPKPTTRPATVTSERTHKVEGLPLESKTERSSVIKS 287
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 243 GSRAPSSLTWSTSTVKAAASTQKTLERGRSSISACTL 353
G R+ SSL S+S+ AAA++++ L G++S A L
Sbjct: 25 GVRSLSSLQPSSSSSAAAAASEEVLVEGKASARAAVL 61
>02_04_0185 -
20748206-20748405,20749067-20749232,20749373-20749471,
20749487-20749561,20749663-20749743,20750121-20750274,
20750330-20750425,20750518-20750727,20750746-20750957
Length = 430
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 16 RVPVSYLKKQNNDD*FVLRSRVGALQSCSTHS*GAKPQSQ-LKVGRSPPRGAPET*ISEV 192
R+P S LKK N D + S GAL++ ST KP S ++ + PP + +V
Sbjct: 324 RLPASALKKDNAPDVAMKESSDGALETQST-----KPSSDGQQINKEPPSVVEDNKQEDV 378
Query: 193 E 195
E
Sbjct: 379 E 379
>01_01_1167 - 9301114-9301490,9302251-9302808,9303054-9303093
Length = 324
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 249 RAPSSLTWSTSTVKAAASTQKTLERGRSSIS 341
R PSS W T + AA +T++ L GR SIS
Sbjct: 137 RKPSSSCWRTVVIMAATTTRRRL-AGRWSIS 166
>12_01_0668 -
5682664-5682916,5684542-5684576,5684643-5684693,
5685362-5685505,5685981-5686265,5686369-5686441,
5687123-5687343,5687447-5687524,5687626-5687688,
5688700-5688900
Length = 467
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -2
Query: 466 QKLESVLDLG---QLLFVGRRSGKYLRIEVISESLVE 365
Q LE +LDLG + F+G G+YLR IS+ +E
Sbjct: 85 QLLEVILDLGRRPEARFLGDSGGQYLRDSEISQQELE 121
>07_03_1162 + 24437396-24438652
Length = 418
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -1
Query: 563 RTLRSWTRLRRGLSQLGSD*GRLRTFDHRGICPKAGERPRSWPASLCRQALRQ 405
RTL+SW +R G ++L G + G CP+ P+ +C+ + Q
Sbjct: 282 RTLQSWLDMRAGAARLMGKYGVVTC----GYCPEVQVGPKGHKVRMCKASKHQ 330
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,477,250
Number of Sequences: 37544
Number of extensions: 281256
Number of successful extensions: 865
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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