Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D22
(420 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 213 5e-56
03_01_0547 + 4093196-4093657,4094267-4095148 213 5e-56
03_01_0544 + 4082528-4082989,4083585-4084466 213 5e-56
03_01_0543 + 4076981-4077442,4078145-4079026 213 5e-56
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 58 3e-09
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 55 2e-08
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 55 2e-08
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 51 4e-07
02_04_0462 + 23131433-23132836 33 0.12
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 30 0.87
05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152 29 1.5
10_08_1038 - 22485394-22485960,22486712-22487197 28 2.7
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 28 2.7
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 28 2.7
11_06_0596 + 25385744-25388890 28 3.5
06_03_1311 - 29241884-29242054,29242802-29242879,29242968-292430... 28 3.5
11_04_0242 - 15273774-15274043,15274131-15274235 27 4.6
04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 27 4.6
03_05_0896 - 28592658-28593331,28594069-28595455 27 4.6
12_01_0171 - 1268803-1269500,1271491-1271567,1271941-1272065,127... 27 6.1
11_03_0079 + 9669666-9669728,9670779-9672545 27 6.1
03_05_0010 + 19622430-19622512,19622539-19623082,19623361-196237... 27 6.1
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 27 8.1
08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420 27 8.1
07_03_1091 + 23899825-23900649,23900750-23900998,23901104-239011... 27 8.1
02_05_0254 - 27177167-27177393,27177476-27177725,27177818-271780... 27 8.1
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136... 27 8.1
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 213 bits (520), Expect = 5e-56
Identities = 94/137 (68%), Positives = 117/137 (85%)
Frame = +1
Query: 10 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 189
GDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCH
Sbjct: 293 GDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCH 352
Query: 190 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 369
T+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRF
Sbjct: 353 TSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRF 412
Query: 370 AVRDMRQTVADGVIKAV 420
AVRDMRQTVA GVIK V
Sbjct: 413 AVRDMRQTVAVGVIKNV 429
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 213 bits (520), Expect = 5e-56
Identities = 94/137 (68%), Positives = 117/137 (85%)
Frame = +1
Query: 10 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 189
GDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCH
Sbjct: 293 GDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCH 352
Query: 190 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 369
T+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRF
Sbjct: 353 TSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRF 412
Query: 370 AVRDMRQTVADGVIKAV 420
AVRDMRQTVA GVIK V
Sbjct: 413 AVRDMRQTVAVGVIKNV 429
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 213 bits (520), Expect = 5e-56
Identities = 94/137 (68%), Positives = 117/137 (85%)
Frame = +1
Query: 10 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 189
GDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCH
Sbjct: 293 GDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCH 352
Query: 190 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 369
T+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRF
Sbjct: 353 TSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRF 412
Query: 370 AVRDMRQTVADGVIKAV 420
AVRDMRQTVA GVIK V
Sbjct: 413 AVRDMRQTVAVGVIKNV 429
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 213 bits (520), Expect = 5e-56
Identities = 94/137 (68%), Positives = 117/137 (85%)
Frame = +1
Query: 10 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 189
GDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCH
Sbjct: 293 GDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCH 352
Query: 190 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 369
T+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRF
Sbjct: 353 TSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRF 412
Query: 370 AVRDMRQTVADGVIKAV 420
AVRDMRQTVA GVIK V
Sbjct: 413 AVRDMRQTVAVGVIKNV 429
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 58.0 bits (134), Expect = 3e-09
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Frame = +1
Query: 13 DNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQISNGYTPVLDC 186
+NV + + +++ G+V S NP +F AQ+ +L + GY VL
Sbjct: 286 ENVRVKLSGIEDEDIMAGFVLS-SIGNPVGAVTEFNAQLQILELLDNAIFTAGYKAVLHI 344
Query: 187 HTAHIACKFAEIKEKVDRRTGKSTEDNPKS-------IKSGDAAIVNLVPSKPLCVESFQ 345
H+ C+ ++ E++D + K + K +K+G + + + +C+E+F
Sbjct: 345 HSVVEECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNNLICIENFS 404
Query: 346 EFPPLGRFAVR 378
+FP LGRF +R
Sbjct: 405 DFPQLGRFTLR 415
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 55.2 bits (127), Expect = 2e-08
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +1
Query: 1 ARGGDNVGFNVKNVSVKELRRGYVAGDSKNNP--PRGAADFTA-QVIVLNHPGQISNGYT 171
AR GDNV +++ + +L + G NP P ++F +V+VL+ I GY
Sbjct: 537 ARAGDNVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQ 592
Query: 172 PVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEF 351
H A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F +
Sbjct: 593 VEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKC 651
Query: 352 PPLGRFAVRDMRQTVADGVI 411
LGR +R T+A GV+
Sbjct: 652 RALGRAFLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 55.2 bits (127), Expect = 2e-08
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +1
Query: 1 ARGGDNVGFNVKNVSVKELRRGYVAGDSKNNP--PRGAADFTA-QVIVLNHPGQISNGYT 171
AR GDNV +++ + +L + G NP P ++F +V+VL+ I GY
Sbjct: 537 ARAGDNVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQ 592
Query: 172 PVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEF 351
H A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F +
Sbjct: 593 VEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKC 651
Query: 352 PPLGRFAVRDMRQTVADGVI 411
LGR +R T+A GV+
Sbjct: 652 RALGRAFLRSSGSTIAVGVV 671
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 50.8 bits (116), Expect = 4e-07
Identities = 34/140 (24%), Positives = 64/140 (45%)
Frame = +1
Query: 1 ARGGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVL 180
AR GDNV ++ + + G V + P A+ +++VL+ I G
Sbjct: 521 ARAGDNVAIGLQGIDPSHIMPGGVICHP-DYPVSVASCLELKILVLDITVPILVGL---- 575
Query: 181 DCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 360
++ +I ++++TGK+++ P+ + S A++ + K +CVE F L
Sbjct: 576 -----QVSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKAL 630
Query: 361 GRFAVRDMRQTVADGVIKAV 420
GR +R T+A G++ V
Sbjct: 631 GRVFLRSQGNTIAVGIVSRV 650
>02_04_0462 + 23131433-23132836
Length = 467
Score = 32.7 bits (71), Expect = 0.12
Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 3/143 (2%)
Frame = +1
Query: 1 ARGGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIS---NGYT 171
A GDNVG ++ + ++ RG V + P D V+ + G+ S GY
Sbjct: 337 AMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKDEGGRHSPFFPGYR 396
Query: 172 PVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEF 351
P T + +I D + K GD + + +P+ E
Sbjct: 397 PQFYMRTTDVTGNVTKIMNDKD--------EEAKMCMPGDRVKMVVELIQPVACEQGM-- 446
Query: 352 PPLGRFAVRDMRQTVADGVIKAV 420
RFA+R+ +TV GVI +
Sbjct: 447 ----RFAIREGGKTVGAGVINTI 465
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 29.9 bits (64), Expect = 0.87
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 357 GWEFL-EGLHTQGLGGNQVDNGGITRFNGF 271
G E+L EG + GGN +DN G+T +N F
Sbjct: 365 GMEYLFEGCSSITEGGNSMDNSGVTEYNLF 394
>05_03_0304 - 12000760-12001164,12001176-12001273,12004858-12005152
Length = 265
Score = 29.1 bits (62), Expect = 1.5
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 293 PPLSTWFPPSPCVW 334
PP+S+ PPSPC W
Sbjct: 175 PPISSGMPPSPCEW 188
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 120 SASHCAKS--PRSNIKRIHTCIGLPHSPHSL 206
S+S CA + P NI RIH IGL SP L
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIGLARSPAHL 126
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -2
Query: 293 ASPDLMDLGLSSVDLPVRRSTFSL 222
A+ DLM G+S V+LPVRR+ F++
Sbjct: 580 ATLDLMYSGISMVNLPVRRNHFAV 603
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 28.3 bits (60), Expect = 2.7
Identities = 33/137 (24%), Positives = 56/137 (40%)
Frame = +1
Query: 10 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 189
GDNVG ++ + +++RG V K + F A++ VL +T L +
Sbjct: 331 GDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLTKDE--GGRHTAFLSNY 386
Query: 190 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 369
+ + A++ KV D + + GD P+ +E Q RF
Sbjct: 387 SPQFYFRTADVTGKV------VLPDGVEMVMPGDNVTAGFELISPVPLEPGQ------RF 434
Query: 370 AVRDMRQTVADGVIKAV 420
A+R+ +TV GV+ V
Sbjct: 435 ALREGGRTVGAGVVSKV 451
>11_06_0596 + 25385744-25388890
Length = 1048
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 218 KSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSP 340
K+ K +N+ TTL L++ M P+S+W + +P
Sbjct: 832 KANLKDLFAQINKLHTTLRSLSIRMKPVSSWGSTEAVLMTP 872
>06_03_1311 -
29241884-29242054,29242802-29242879,29242968-29243049,
29243141-29243212,29243316-29243437,29243541-29243596,
29244264-29244333,29244435-29244518,29244599-29244667,
29244855-29244928,29245014-29245125,29245220-29245510
Length = 426
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 215 PKSKRKSTVVLVNQQRTTLNPLNLVMP 295
P+ R+S + Q TT++P NLV+P
Sbjct: 103 PRRNRRSPALRAAFQETTISPANLVLP 129
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 214 QICRLCGLCGNPIQVCI 164
QIC +C CG P VCI
Sbjct: 74 QICAVCTCCGGPHGVCI 90
>04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888
Length = 748
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 58 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGY 168
RRG +++ PR +A + QV+ HP +S GY
Sbjct: 175 RRGSNCVENRRRKPRSSAQSSPQVVTPRHP--VSEGY 209
>03_05_0896 - 28592658-28593331,28594069-28595455
Length = 686
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 196 HIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 357
H+ + EIK+ +R G+ + ++++GD SKP E F P
Sbjct: 638 HVVLRIEEIKKSSERLEGRDPQQQASNLEAGDDQ-----TSKPESAEGLNPFAP 686
>12_01_0171 -
1268803-1269500,1271491-1271567,1271941-1272065,
1272146-1272234,1272851-1272936,1273509-1273765
Length = 443
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 357 GWEFL-EGLHTQGLGGNQVDNGGITRFNGF 271
G E+L EG + GGN +DN G+ +N F
Sbjct: 362 GMEYLFEGCSSITEGGNSMDNSGMAEYNLF 391
>11_03_0079 + 9669666-9669728,9670779-9672545
Length = 609
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 115 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 237
FTA+ +H Q++N VLDC AH+ CK+ + E ++
Sbjct: 572 FTAENRSKSH--QVNN-VLAVLDCLQAHMECKYDMLTESLE 609
>03_05_0010 +
19622430-19622512,19622539-19623082,19623361-19623767,
19623831-19624167,19624290-19624508,19625522-19625826,
19626128-19626287,19626422-19626547
Length = 726
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 220 IKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPS 318
IKE + R GKST D P +G I PS
Sbjct: 207 IKEAITTRGGKSTRDPPYPNPTGTNGIAREAPS 239
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 26.6 bits (56), Expect = 8.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 407 TPSATVCLMSRTAKRPRGGNSWKDSTHRGLEGTRLTMAASPDLMDLGLSS 258
TP L + A+R GN + + +R + + AA DL DLGL+S
Sbjct: 144 TPPGFSRLTAADAERAVSGNLCRCTGYRPILDACKSFAADVDLEDLGLNS 193
>08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420
Length = 647
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 115 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 237
FTA+ +H Q++N +LDC AH+ CK+ + E ++
Sbjct: 610 FTAENRSKSH--QVNN-VLAILDCLQAHMECKYDMLTESLE 647
>07_03_1091 +
23899825-23900649,23900750-23900998,23901104-23901195,
23901413-23902193
Length = 648
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 93 VVFRISCNVTTAQFLDRYVFDVETNIVTASC 1
V R CN +++D+++ D+E+ + A C
Sbjct: 533 VALRSECNCWFLKYIDKFLDDIESETMYAPC 563
>02_05_0254 -
27177167-27177393,27177476-27177725,27177818-27178054,
27178138-27178296,27179454-27179527,27180929-27181172
Length = 396
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -2
Query: 350 NSWKDSTHRGLEGTRLTMAASPDLMDLGLSSVDLPVRRSTFSLISANLQA 201
N + RGL+GT A S L G S + + + F+ + N+ A
Sbjct: 133 NKTSNPLFRGLQGTNFASAGSGILDSTGQSIIPMSKQVQQFAAVQRNISA 182
>02_01_0202 +
1366149-1366594,1368444-1368444,1368616-1368743,
1368943-1369039
Length = 223
Score = 26.6 bits (56), Expect = 8.1
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 10 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVL 180
GD+ G V RR V GD + P + DF V++L H S+GY +L
Sbjct: 20 GDSGGGEAPAAEVLRRRRVPVPGDGLSPIPMFSVDFRLFVLILPH----SHGYLVLL 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,333,385
Number of Sequences: 37544
Number of extensions: 346390
Number of successful extensions: 1215
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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