BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D22
(420 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF063021-3|AAC16247.1| 484|Anopheles gambiae dopa decarboxylase... 28 0.12
AF063021-2|AAC16249.1| 515|Anopheles gambiae dopa decarboxylase... 28 0.12
U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase... 24 2.0
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 23 3.4
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 23 3.4
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 23 3.4
AY341231-1|AAR13795.1| 231|Anopheles gambiae vacuolar ATPase pr... 23 3.4
AY341230-1|AAR13794.1| 231|Anopheles gambiae vacuolar ATPase pr... 23 3.4
AY341229-1|AAR13793.1| 231|Anopheles gambiae vacuolar ATPase pr... 23 3.4
AY341228-1|AAR13792.1| 231|Anopheles gambiae vacuolar ATPase pr... 23 3.4
AY341227-1|AAR13791.1| 231|Anopheles gambiae vacuolar ATPase pr... 23 3.4
AY341226-1|AAR13790.1| 231|Anopheles gambiae vacuolar ATPase pr... 23 3.4
AY341225-1|AAR13789.1| 231|Anopheles gambiae vacuolar ATPase pr... 23 3.4
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 4.5
AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein... 22 7.9
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s... 22 7.9
>AF063021-3|AAC16247.1| 484|Anopheles gambiae dopa decarboxylase
isoform 2 protein.
Length = 484
Score = 28.3 bits (60), Expect = 0.12
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +2
Query: 191 QPT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHPSVVS 370
+P P P+ K V+ + +R ++MP ++ W P + P+ NS+P++V+
Sbjct: 49 RPLIPDEAPQQPEKWEEVMADVER-------VIMPGVTHWHSPKFHAYFPTANSYPAIVA 101
>AF063021-2|AAC16249.1| 515|Anopheles gambiae dopa decarboxylase
isoform 1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 0.12
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +2
Query: 191 QPT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHPSVVS 370
+P P P+ K V+ + +R ++MP ++ W P + P+ NS+P++V+
Sbjct: 80 RPLIPDEAPQQPEKWEEVMADVER-------VIMPGVTHWHSPKFHAYFPTANSYPAIVA 132
>U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase
protein.
Length = 332
Score = 24.2 bits (50), Expect = 2.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 105 SCRLHSASHCAKSPRSNIKRIH 170
S RLH+A CA+ PR K H
Sbjct: 95 SRRLHAAGFCARRPRKVRKLQH 116
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 23.4 bits (48), Expect = 3.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 105 SCRLHSASHCAKSPR 149
S RLH+A CA+ PR
Sbjct: 23 SRRLHAAGFCARRPR 37
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.4 bits (48), Expect = 3.4
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 93 PTQGSC-RLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQ 224
P + C R H A + RS R + CI + H + C+N+
Sbjct: 503 PERQRCFRCLEMGHIASNCRSTADRQNLCIRCGLTGHKARSCQNE 547
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 23.4 bits (48), Expect = 3.4
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = -3
Query: 262 PLLIYQYDGRLSL*FRQICRLCGLCGNPIQVC 167
P +YQY + Q+ C NPI C
Sbjct: 493 PTFVYQYVNSSGIALVQLMAYISSCCNPITYC 524
>AY341231-1|AAR13795.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 23.4 bits (48), Expect = 3.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 165 IHTCIGLPHSPHSLQICR 218
I + GLPH+ + QICR
Sbjct: 26 IFSAAGLPHNEIAAQICR 43
>AY341230-1|AAR13794.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 23.4 bits (48), Expect = 3.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 165 IHTCIGLPHSPHSLQICR 218
I + GLPH+ + QICR
Sbjct: 26 IFSAAGLPHNEIAAQICR 43
>AY341229-1|AAR13793.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 23.4 bits (48), Expect = 3.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 165 IHTCIGLPHSPHSLQICR 218
I + GLPH+ + QICR
Sbjct: 26 IFSAAGLPHNEIAAQICR 43
>AY341228-1|AAR13792.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 23.4 bits (48), Expect = 3.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 165 IHTCIGLPHSPHSLQICR 218
I + GLPH+ + QICR
Sbjct: 26 IFSAAGLPHNEIAAQICR 43
>AY341227-1|AAR13791.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 23.4 bits (48), Expect = 3.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 165 IHTCIGLPHSPHSLQICR 218
I + GLPH+ + QICR
Sbjct: 26 IFSAAGLPHNEIAAQICR 43
>AY341226-1|AAR13790.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 23.4 bits (48), Expect = 3.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 165 IHTCIGLPHSPHSLQICR 218
I + GLPH+ + QICR
Sbjct: 26 IFSAAGLPHNEIAAQICR 43
>AY341225-1|AAR13789.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 23.4 bits (48), Expect = 3.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 165 IHTCIGLPHSPHSLQICR 218
I + GLPH+ + QICR
Sbjct: 26 IFSAAGLPHNEIAAQICR 43
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.0 bits (47), Expect = 4.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 285 W*CRHCQPGSLQAPVCGVLPGIPTPRS 365
W RH GSL VC +L PTP S
Sbjct: 12 WRRRHLLTGSLLLLVCLLLAIDPTPVS 38
>AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 695
Score = 22.2 bits (45), Expect = 7.9
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 410 ITPSATVCLMSRTA 369
I+P+ATVC MS+ A
Sbjct: 616 ISPNATVCPMSKGA 629
>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
symporter protein.
Length = 1127
Score = 22.2 bits (45), Expect = 7.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 417 SLYYTVGDRLPHVTHGETTEGWEFLEGL 334
SLY V R P V G TT+ + L
Sbjct: 642 SLYLIVSYRKPDVNWGSTTQAQTYKNAL 669
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.317 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,227
Number of Sequences: 2352
Number of extensions: 12395
Number of successful extensions: 34
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -