Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D22
(420 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 271 2e-75
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 270 6e-75
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 208 2e-56
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 60 1e-11
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.80
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 3.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 3.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 4.3
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 5.6
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 5.6
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 5.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 7.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 7.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.5
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 7.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 9.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 9.9
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 20 9.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 9.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 9.9
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 271 bits (665), Expect = 2e-75
Identities = 126/137 (91%), Positives = 132/137 (96%)
Frame = +1
Query: 10 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 189
GDNVGFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVLNHPGQISNGYTPVLDCH
Sbjct: 305 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCH 364
Query: 190 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 369
TAHIACKFA+IKEK DRR GK+TE+NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRF
Sbjct: 365 TAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRF 424
Query: 370 AVRDMRQTVADGVIKAV 420
AVRDMRQTVA GVIKAV
Sbjct: 425 AVRDMRQTVAVGVIKAV 441
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 270 bits (661), Expect = 6e-75
Identities = 125/137 (91%), Positives = 132/137 (96%)
Frame = +1
Query: 10 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 189
GDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPVLDCH
Sbjct: 305 GDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 364
Query: 190 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 369
TAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRF
Sbjct: 365 TAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRF 424
Query: 370 AVRDMRQTVADGVIKAV 420
AVRDMRQTVA GVIK+V
Sbjct: 425 AVRDMRQTVAVGVIKSV 441
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 208 bits (508), Expect = 2e-56
Identities = 96/104 (92%), Positives = 100/104 (96%)
Frame = +1
Query: 10 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 189
GDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPVLDCH
Sbjct: 16 GDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 75
Query: 190 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 321
TAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 76 TAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 60.1 bits (139), Expect = 1e-11
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 10 GDNVGFNVKNVSVKELRRGYVAGDSKN 90
GDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 248 GDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 0.80
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 87 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 197
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 3.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 43 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 150
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
Score = 21.4 bits (43), Expect = 4.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 345 LEGLHTQGLGGNQVDNGGITRFNGFRVV 262
L LHT L N++ G FNG V+
Sbjct: 382 LYNLHTLELSDNKLRTVGAQLFNGLFVL 409
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 230 KSTVVLVNQQRTTLNPLNLVM 292
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 4.3
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 14 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 136
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1
Query: 340 FQEFPPLGRFAVRDMRQTVADGVI 411
F +PP G F ++ + DG++
Sbjct: 226 FYPYPPYGTFNIKGDTFDLMDGIL 249
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.0 bits (42), Expect = 5.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 265 NPKSIKSGDAAIVNLVPSKPLC 330
NP+ G +V L PS P C
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC 87
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.0 bits (42), Expect = 5.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 265 NPKSIKSGDAAIVNLVPSKPLC 330
NP+ G +V L PS P C
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC 88
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 7.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 230 KSTVVLVNQQRTTLNPLNLVM 292
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 7.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 230 KSTVVLVNQQRTTLNPLNLVM 292
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 7.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 102 GSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESR 236
G LHSA S SN+ + T + P +Q + ++S+
Sbjct: 938 GHSVLHSAQSVVASSASNVTNVTTNLTTILPPVKVQSQQQSQQSQ 982
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 7.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 90 QPTQGSCRLHSASHCAKSPRS 152
Q TQ LH S A+SP S
Sbjct: 665 QHTQSQLHLHLTSPPARSPSS 685
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 9.9
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 223 KEKVDRRTGKSTEDNPKSIKS 285
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 9.9
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 223 KEKVDRRTGKSTEDNPKSIKS 285
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.2 bits (40), Expect = 9.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 254 QQRTTLNPLNLVMPPLSTW 310
+ RT L+P N +P + W
Sbjct: 380 KSRTNLDPSNRKLPAPANW 398
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 9.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 230 KSTVVLVNQQRTTLNPLNLVM 292
KST +R T+NP ++++
Sbjct: 142 KSTTTTAEVKRDTINPEDVIL 162
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 9.9
Identities = 13/55 (23%), Positives = 22/55 (40%)
Frame = +3
Query: 78 RFEKQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESRPS 242
+ K P S ++ S S N+ R G+P ++ RNQ++ S
Sbjct: 1261 QMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRDQRAMTEARNQQQQASS 1315
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,350
Number of Sequences: 438
Number of extensions: 3101
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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