Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D21
         (182 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   1.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   1.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   2.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    19   4.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    19   4.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       18   8.1  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 8/17 (47%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
 Frame = +2

Query: 35  NAIV--SLFIYFQQWNT 79
           NA++  +LF++FQ W T
Sbjct: 267 NALIVRALFLFFQLWAT 283


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 8/17 (47%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
 Frame = +2

Query: 35  NAIV--SLFIYFQQWNT 79
           NA++  +LF++FQ W T
Sbjct: 263 NALIVRALFLFFQLWAT 279


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3

Query: 138 NGEKDCTE 161
           NGEKDC++
Sbjct: 137 NGEKDCSD 144


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 99  WCFIFICLSIIIN 137
           +C I +CL +I N
Sbjct: 74  FCIIIMCLGVIGN 86


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 99  WCFIFICLSIIIN 137
           +C I +CL +I N
Sbjct: 74  FCIIIMCLGVIGN 86


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 177 IIYGSVPCNP 148
           I+YG  P NP
Sbjct: 345 ILYGRTPPNP 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,115
Number of Sequences: 336
Number of extensions: 663
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 40
effective length of database: 109,145
effective search space used:  2182900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)