BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D20
(332 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associat... 109 2e-24
BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein. 109 2e-24
BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein. 109 2e-24
AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein. 109 2e-24
AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen r... 109 2e-24
AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associa... 109 2e-24
S85655-1|AAB21614.1| 272|Homo sapiens prohibitin protein. 64 1e-10
L14272-1|AAO18340.1| 272|Homo sapiens prohibitin protein. 64 1e-10
CR541706-1|CAG46507.1| 272|Homo sapiens PHB protein. 64 1e-10
BT007411-1|AAP36079.1| 272|Homo sapiens prohibitin protein. 64 1e-10
BC095460-1|AAH95460.1| 272|Homo sapiens prohibitin protein. 64 1e-10
BC013401-1|AAH13401.1| 272|Homo sapiens prohibitin protein. 64 1e-10
AK223181-1|BAD96901.1| 272|Homo sapiens prohibitin variant prot... 64 1e-10
AY577780-1|AAS88903.1| 272|Homo sapiens prohibitin protein. 60 2e-09
BC005085-1|AAH05085.1| 156|Homo sapiens ZNF607 protein protein. 50 1e-06
>U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associated
protein protein.
Length = 299
Score = 109 bits (262), Expect = 2e-24
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 MAQSKLNDMAGKFAKGGPPGLNIGLKXXXXXXXXXYGISQSLFTVEGGHRAIMFNRIGGV 253
MAQ+ L D+AG+ GP G+ LK YG+ +S+FTVEGGHRAI FNRIGGV
Sbjct: 1 MAQN-LKDLAGRLP-AGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGV 58
Query: 254 QQH-VMSEGIHFRIPWFQYPVIYDIRS 331
QQ +++EG+HFRIPWFQYP+IYDIR+
Sbjct: 59 QQDTILAEGLHFRIPWFQYPIIYDIRA 85
>BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 109 bits (262), Expect = 2e-24
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 MAQSKLNDMAGKFAKGGPPGLNIGLKXXXXXXXXXYGISQSLFTVEGGHRAIMFNRIGGV 253
MAQ+ L D+AG+ GP G+ LK YG+ +S+FTVEGGHRAI FNRIGGV
Sbjct: 1 MAQN-LKDLAGRLP-AGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGV 58
Query: 254 QQH-VMSEGIHFRIPWFQYPVIYDIRS 331
QQ +++EG+HFRIPWFQYP+IYDIR+
Sbjct: 59 QQDTILAEGLHFRIPWFQYPIIYDIRA 85
>BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 109 bits (262), Expect = 2e-24
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 MAQSKLNDMAGKFAKGGPPGLNIGLKXXXXXXXXXYGISQSLFTVEGGHRAIMFNRIGGV 253
MAQ+ L D+AG+ GP G+ LK YG+ +S+FTVEGGHRAI FNRIGGV
Sbjct: 1 MAQN-LKDLAGRLP-AGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGV 58
Query: 254 QQH-VMSEGIHFRIPWFQYPVIYDIRS 331
QQ +++EG+HFRIPWFQYP+IYDIR+
Sbjct: 59 QQDTILAEGLHFRIPWFQYPIIYDIRA 85
>AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein.
Length = 299
Score = 109 bits (262), Expect = 2e-24
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 MAQSKLNDMAGKFAKGGPPGLNIGLKXXXXXXXXXYGISQSLFTVEGGHRAIMFNRIGGV 253
MAQ+ L D+AG+ GP G+ LK YG+ +S+FTVEGGHRAI FNRIGGV
Sbjct: 1 MAQN-LKDLAGRLP-AGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGV 58
Query: 254 QQH-VMSEGIHFRIPWFQYPVIYDIRS 331
QQ +++EG+HFRIPWFQYP+IYDIR+
Sbjct: 59 QQDTILAEGLHFRIPWFQYPIIYDIRA 85
>AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen
receptor activity protein.
Length = 299
Score = 109 bits (262), Expect = 2e-24
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 MAQSKLNDMAGKFAKGGPPGLNIGLKXXXXXXXXXYGISQSLFTVEGGHRAIMFNRIGGV 253
MAQ+ L D+AG+ GP G+ LK YG+ +S+FTVEGGHRAI FNRIGGV
Sbjct: 1 MAQN-LKDLAGRLP-AGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGV 58
Query: 254 QQH-VMSEGIHFRIPWFQYPVIYDIRS 331
QQ +++EG+HFRIPWFQYP+IYDIR+
Sbjct: 59 QQDTILAEGLHFRIPWFQYPIIYDIRA 85
>AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associated
protein BAP37 protein.
Length = 299
Score = 109 bits (262), Expect = 2e-24
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +2
Query: 74 MAQSKLNDMAGKFAKGGPPGLNIGLKXXXXXXXXXYGISQSLFTVEGGHRAIMFNRIGGV 253
MAQ+ L D+AG+ GP G+ LK YG+ +S+FTVEGGHRAI FNRIGGV
Sbjct: 1 MAQN-LKDLAGRLP-AGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGV 58
Query: 254 QQH-VMSEGIHFRIPWFQYPVIYDIRS 331
QQ +++EG+HFRIPWFQYP+IYDIR+
Sbjct: 59 QQDTILAEGLHFRIPWFQYPIIYDIRA 85
>S85655-1|AAB21614.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ +L+ V+ GHRA++F+R GVQ V+ EG HF IPW Q P+I+D RS
Sbjct: 23 VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRS 71
>L14272-1|AAO18340.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ +L+ V+ GHRA++F+R GVQ V+ EG HF IPW Q P+I+D RS
Sbjct: 23 VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRS 71
>CR541706-1|CAG46507.1| 272|Homo sapiens PHB protein.
Length = 272
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ +L+ V+ GHRA++F+R GVQ V+ EG HF IPW Q P+I+D RS
Sbjct: 23 VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRS 71
>BT007411-1|AAP36079.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ +L+ V+ GHRA++F+R GVQ V+ EG HF IPW Q P+I+D RS
Sbjct: 23 VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRS 71
>BC095460-1|AAH95460.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ +L+ V+ GHRA++F+R GVQ V+ EG HF IPW Q P+I+D RS
Sbjct: 23 VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRS 71
>BC013401-1|AAH13401.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ +L+ V+ GHRA++F+R GVQ V+ EG HF IPW Q P+I+D RS
Sbjct: 23 VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRS 71
>AK223181-1|BAD96901.1| 272|Homo sapiens prohibitin variant
protein.
Length = 272
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ +L+ V+ GHRA++F+R GVQ V+ EG HF IPW Q P+I+D RS
Sbjct: 23 VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRS 71
>AY577780-1|AAS88903.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ +L+ V+ GHRA++F+R GVQ V+ EG HF IPW Q +I+D RS
Sbjct: 23 VNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKLIIFDCRS 71
>BC005085-1|AAH05085.1| 156|Homo sapiens ZNF607 protein protein.
Length = 156
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYD 322
++ +L V+ GHRA +F++ GVQ V+ EG HF IP Q P+I+D
Sbjct: 23 VTSALCNVDAGHRAAIFDQFRGVQNIVVGEGTHFLIPCVQKPIIFD 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,254,464
Number of Sequences: 237096
Number of extensions: 1122272
Number of successful extensions: 2888
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2882
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -