Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D20
         (332 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   3.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   5.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   5.2  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   9.1  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 225 LLCSIE*EEYNNML*ARVFTLGY 293
           LLC++E EE  N+L     TL Y
Sbjct: 108 LLCNVEAEENYNLLEDIYETLSY 130


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 128 PGLNIGLKXXXXXXXXXYGISQSLFTV 208
           PG+ IG+          Y ++QSL  V
Sbjct: 13  PGITIGVHILDTCGRDTYALNQSLHFV 39


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 128 PGLNIGLKXXXXXXXXXYGISQSLFTV 208
           PG+ IG+          Y ++QSL  V
Sbjct: 103 PGITIGVHILDTCGRDTYALNQSLHFV 129


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 74  YLPIINSYQIAQFMKIFITSND 9
           ++ I+N + I QF+    TSN+
Sbjct: 479 FIGIVNQFHILQFITKNGTSNN 500


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,630
Number of Sequences: 438
Number of extensions: 2200
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)