Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D20
(332 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g03860.3 68414.m00370 prohibitin, putative similar to SP|P241... 82 1e-16
At1g03860.1 68414.m00369 prohibitin, putative similar to SP|P241... 82 1e-16
At4g28510.1 68417.m04078 prohibitin, putative similar to SP|P241... 77 4e-15
At2g20530.1 68415.m02398 prohibitin, putative similar to SP|P241... 72 8e-14
At5g44140.1 68418.m05402 prohibitin, putative similar to SP|P241... 72 1e-13
At5g14300.1 68418.m01672 prohibitin, putative similar to prohibi... 60 4e-10
At3g27280.2 68416.m03410 prohibitin, putative strong similarity ... 60 4e-10
At3g27280.1 68416.m03409 prohibitin, putative strong similarity ... 60 4e-10
At5g40770.1 68418.m04948 prohibitin identical to prohibitin [Ara... 58 2e-09
At1g03860.2 68414.m00368 prohibitin, putative similar to SP|P241... 29 0.59
At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearl... 28 1.8
At4g00240.1 68417.m00031 phospholipase D beta 2 / PLD beta 2 (PL... 27 2.4
At2g47460.1 68415.m05923 myb family transcription factor (MYB12)... 27 2.4
At5g61820.1 68418.m07757 expressed protein MtN19, Medicago trunc... 27 4.1
At3g62610.1 68416.m07033 myb family transcription factor similar... 27 4.1
At5g42830.1 68418.m05219 transferase family protein similar to a... 25 9.5
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 25 9.5
>At1g03860.3 68414.m00370 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 286
Score = 81.8 bits (193), Expect = 1e-16
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +2
Query: 122 GPPGLNIGLKXXXXXXXXXYGISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWF 301
G P L+ LK Y ++ SL+ V+GGHRA+MFNR+ G+++ V EG HF +PWF
Sbjct: 11 GAPALSALLKVSVIGGLGVYALTNSLYNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWF 70
Query: 302 QYPVIYDIRS 331
+ P+IYD+R+
Sbjct: 71 ERPIIYDVRA 80
>At1g03860.1 68414.m00369 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 286
Score = 81.8 bits (193), Expect = 1e-16
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +2
Query: 122 GPPGLNIGLKXXXXXXXXXYGISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWF 301
G P L+ LK Y ++ SL+ V+GGHRA+MFNR+ G+++ V EG HF +PWF
Sbjct: 11 GAPALSALLKVSVIGGLGVYALTNSLYNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWF 70
Query: 302 QYPVIYDIRS 331
+ P+IYD+R+
Sbjct: 71 ERPIIYDVRA 80
>At4g28510.1 68417.m04078 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 288
Score = 76.6 bits (180), Expect = 4e-15
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +2
Query: 179 YGISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
YG + SL+ VEGGHRAIMFNR+ G++ V EG H IPWF+ PVIYD+R+
Sbjct: 30 YGATHSLYNVEGGHRAIMFNRLVGIKDKVYPEGTHLMIPWFERPVIYDVRA 80
>At2g20530.1 68415.m02398 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 286
Score = 72.1 bits (169), Expect = 8e-14
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = +2
Query: 179 YGISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
YG + +L+ V+GGHRAI+FNR+ G++ V EG H IPWF+ P+IYD+R+
Sbjct: 28 YGATHTLYNVDGGHRAIVFNRLVGIKDKVYPEGTHLMIPWFERPIIYDVRA 78
>At5g44140.1 68418.m05402 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family; non-consensus TT acceptor
splice site at exon 2
Length = 278
Score = 71.7 bits (168), Expect = 1e-13
Identities = 32/70 (45%), Positives = 43/70 (61%)
Frame = +2
Query: 122 GPPGLNIGLKXXXXXXXXXYGISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWF 301
G P L+ LK Y I S++ V+GGHRAI+FNR G++ V EG HF+IP F
Sbjct: 11 GSPALSALLKLGVIGGLGLYCIGSSMYNVDGGHRAIVFNRFTGIKDRVYPEGTHFKIPLF 70
Query: 302 QYPVIYDIRS 331
+ +IYD+RS
Sbjct: 71 ERAIIYDVRS 80
>At5g14300.1 68418.m01672 prohibitin, putative similar to prohibitin
[Arabidopsis thaliana] GI:1946331; contains Pfam profile
PF01145: SPFH domain / Band 7 family
Length = 249
Score = 60.1 bits (139), Expect = 4e-10
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
+ ++FTV+GG RA+MF+R G+ + + EG H +IPW Q P I+DIR+
Sbjct: 20 VRSTMFTVDGGQRAVMFHRFEGILEEPVGEGTHRKIPWVQKPYIFDIRT 68
>At3g27280.2 68416.m03410 prohibitin, putative strong similarity to
prohibitin [Arabidopsis thaliana] GI:1946331; contains
Pfam profile PF01145: SPFH domain / Band 7 family
Length = 279
Score = 60.1 bits (139), Expect = 4e-10
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ SL+TV+GG RA++F+R GV + EG HF IP+ Q P IYDIR+
Sbjct: 28 LNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPYLQTPHIYDIRT 76
>At3g27280.1 68416.m03409 prohibitin, putative strong similarity to
prohibitin [Arabidopsis thaliana] GI:1946331; contains
Pfam profile PF01145: SPFH domain / Band 7 family
Length = 279
Score = 60.1 bits (139), Expect = 4e-10
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ SL+TV+GG RA++F+R GV + EG HF IP+ Q P IYDIR+
Sbjct: 28 LNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPYLQTPHIYDIRT 76
>At5g40770.1 68418.m04948 prohibitin identical to prohibitin
[Arabidopsis thaliana] GI:1946331
Length = 277
Score = 57.6 bits (133), Expect = 2e-09
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +2
Query: 185 ISQSLFTVEGGHRAIMFNRIGGVQQHVMSEGIHFRIPWFQYPVIYDIRS 331
++ SLFTV+GG RA++F+R GV + EG HF IP Q P I+DIR+
Sbjct: 28 LNTSLFTVDGGERAVIFDRFRGVMDQTVGEGTHFLIPILQRPHIFDIRT 76
>At1g03860.2 68414.m00368 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 221
Score = 29.5 bits (63), Expect = 0.59
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 290 IPWFQYPVIYDIRS 331
+PWF+ P+IYD+R+
Sbjct: 2 VPWFERPIIYDVRA 15
>At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearly
identical to acyl-activating enzyme 18 [Arabidopsis
thaliana] GI:29893268; similar to acetyl-CoA synthetase
[SP|P27095] from Methanothrix soehngenii; contains Pfam
AMP-binding enzyme domain PF00501l; identical to cDNA
acyl-activating enzyme 18 (At1g55320) GI: 29893267
Length = 725
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 322 IIDDWILEPWYPKVNTLAHNMLLYSSYS 239
++D+ +L+PW+P H +L YS YS
Sbjct: 49 LVDESVLKPWHPHP---LHQLLYYSVYS 73
>At4g00240.1 68417.m00031 phospholipase D beta 2 / PLD beta 2
(PLDBETA2) / PLDdelta1 identical to SP|O23078
Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD
beta 2) (PLDdelta1) [Arabidopsis thaliana]; contains
Pfam profiles: PF00614 phospholipase D.active site
motif, PF00168 C2 domain
Length = 927
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +3
Query: 30 FHKLCN---LITINYWQVWHKVS*MIWPENSLKVVHLDSTLG*KWQRSSVLQLTVFHNP 197
FH +C LI I W VWH V + E+ L L K Q + L V+ +P
Sbjct: 328 FHAICQARRLIYITGWSVWHNVRLVRDKEDPSSECRLGELLRSKSQEGVRVLLLVWDDP 386
>At2g47460.1 68415.m05923 myb family transcription factor (MYB12)
similar to myb-related DNA-binding protein GI:1020155
from [Arabidopsis thaliana]
Length = 371
Score = 27.5 bits (58), Expect = 2.4
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +3
Query: 18 GYKYFHKLCNLITINYWQVWHKVS*MIWPENSLKVVHLDSTLG*KW 155
G K K C L INY + K I PE VV L STLG +W
Sbjct: 45 GLKRCGKSCRLRWINYLRSDLKRG-NITPEEEELVVKLHSTLGNRW 89
>At5g61820.1 68418.m07757 expressed protein MtN19, Medicago
truncatula, EMBL:MTY15367
Length = 475
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/40 (22%), Positives = 19/40 (47%)
Frame = -2
Query: 310 WILEPWYPKVNTLAHNMLLYSSYSIEHNSPVATFDSKQGL 191
WI+EP+Y + + ++ ++ P + DSK +
Sbjct: 93 WIVEPYYVRKGSKLPQREMFRNHGFSREDPESNLDSKSDI 132
>At3g62610.1 68416.m07033 myb family transcription factor similar to
myb-like transcription factor GI:168590 from [Zea mays]
Length = 343
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +3
Query: 18 GYKYFHKLCNLITINYWQVWHKVS*MIWPENSLKVVHLDSTLG*KW 155
G K K C L INY + K I PE +V L STLG +W
Sbjct: 45 GLKRCGKSCRLRWINYLRSDIKRG-NITPEEEDVIVKLHSTLGTRW 89
>At5g42830.1 68418.m05219 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 450
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 167 RRPLPLLTQC*VQVDHL*RIFRPYHLTYF 81
R PL T C V D+ R++ P H YF
Sbjct: 284 RLPLDRETSCRVAADNRGRMYPPLHKDYF 312
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 25.4 bits (53), Expect = 9.5
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = -2
Query: 322 IIDDWILEP----WYPKVNTLAHNML-LYSSYSIEHNSPVATFDSKQGL*NTVSCSTDDR 158
++D+ L+P KVN +A LYSS S+EH+ P G+ + + +
Sbjct: 726 MLDETFLDPSSQECIQKVNRVADKYWDLYSSESLEHDLPGHLLRYPIGIASEGNITELPG 785
Query: 157 CHF*PNVESR 128
C F P+ ++R
Sbjct: 786 CEFFPDTKAR 795
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,544,579
Number of Sequences: 28952
Number of extensions: 148791
Number of successful extensions: 324
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 390583752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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