SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D19
         (334 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q96K17 Cluster: Transcription factor BTF3 homolog 4; n=...    91   6e-18
UniRef50_UPI0000D9DD8A Cluster: PREDICTED: similar to basic tran...    79   1e-14
UniRef50_Q93ZB5 Cluster: At1g17880/F2H15_10; n=20; Viridiplantae...    72   2e-12
UniRef50_Q2PQI9 Cluster: BTF3-like transcription factor; n=6; Ma...    72   2e-12
UniRef50_Q13892 Cluster: Transcription factor BTF3 homolog 3; n=...    71   7e-12
UniRef50_Q5YET6 Cluster: Transcription factor BTF3; n=1; Bigelow...    61   6e-09
UniRef50_Q2U6N1 Cluster: Nascent polypeptide-associated complex ...    52   2e-06
UniRef50_Q6A1N2 Cluster: Transcription factor BTF3; n=1; Euplote...    49   2e-05
UniRef50_Q54TR8 Cluster: Putative uncharacterized protein; n=1; ...    45   3e-04
UniRef50_Q6C2F3 Cluster: Nascent polypeptide-associated complex ...    45   3e-04
UniRef50_A0CH86 Cluster: Chromosome undetermined scaffold_18, wh...    40   0.011
UniRef50_Q4UDF4 Cluster: Transcription factor btf3 homolog, puta...    40   0.015
UniRef50_UPI000155321F Cluster: PREDICTED: similar to Btf3 prote...    39   0.019
UniRef50_Q86NT7 Cluster: AT11810p; n=2; Drosophila melanogaster|...    39   0.025
UniRef50_Q5CX56 Cluster: BTF domain, basal transcription factor;...    38   0.059
UniRef50_Q0IGS9 Cluster: RT01104p; n=4; Drosophila melanogaster|...    37   0.10 
UniRef50_UPI0000D9B4C6 Cluster: PREDICTED: basic transcription f...    35   0.31 
UniRef50_Q9VY38 Cluster: CG18157-PA; n=1; Drosophila melanogaste...    35   0.31 
UniRef50_Q751F1 Cluster: Nascent polypeptide-associated complex ...    34   0.72 
UniRef50_Q73RD7 Cluster: Amino acid permease family protein; n=1...    31   3.9  
UniRef50_Q0C9U9 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_UPI0000F2C851 Cluster: PREDICTED: similar to BTF3a; n=1...    30   8.9  
UniRef50_Q01LQ4 Cluster: OSIGBa0135K14.8 protein; n=7; Oryza sat...    30   8.9  

>UniRef50_Q96K17 Cluster: Transcription factor BTF3 homolog 4; n=59;
           Eukaryota|Rep: Transcription factor BTF3 homolog 4 -
           Homo sapiens (Human)
          Length = 158

 Score = 90.6 bits (215), Expect = 6e-18
 Identities = 46/66 (69%), Positives = 47/66 (71%)
 Frame = +1

Query: 136 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 315
           MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIEEVNMI
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60

Query: 316 KDDGTV 333
           KDDGTV
Sbjct: 61  KDDGTV 66


>UniRef50_UPI0000D9DD8A Cluster: PREDICTED: similar to basic
           transcription factor 3; n=1; Macaca mulatta|Rep:
           PREDICTED: similar to basic transcription factor 3 -
           Macaca mulatta
          Length = 372

 Score = 79.4 bits (187), Expect = 1e-14
 Identities = 41/67 (61%), Positives = 44/67 (65%)
 Frame = +1

Query: 133 IMNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 312
           IMN EKL KLQ+QVRI GKGT RRKKKVVH TA  DD           VN I GIEEVN+
Sbjct: 5   IMNQEKLAKLQAQVRISGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNDISGIEEVNV 64

Query: 313 IKDDGTV 333
             + GTV
Sbjct: 65  FTNQGTV 71


>UniRef50_Q93ZB5 Cluster: At1g17880/F2H15_10; n=20;
           Viridiplantae|Rep: At1g17880/F2H15_10 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 165

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 36/63 (57%), Positives = 40/63 (63%)
 Frame = +1

Query: 136 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 315
           MN EKL K+ + VR GGKGT RRKKK VH T  TDD           VN+IP IEEVN+ 
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTNTTDDKRLQSTLKRIGVNSIPPIEEVNIF 60

Query: 316 KDD 324
           KDD
Sbjct: 61  KDD 63


>UniRef50_Q2PQI9 Cluster: BTF3-like transcription factor; n=6;
           Magnoliophyta|Rep: BTF3-like transcription factor -
           Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
          Length = 162

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 35/63 (55%), Positives = 39/63 (61%)
 Frame = +1

Query: 136 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 315
           MN EKL+K+   VR GGKGT RRKKK VH T  TDD           VN IP IEEVN+ 
Sbjct: 1   MNVEKLQKMAGSVRTGGKGTMRRKKKAVHKTTTTDDKRLQSTLKRIGVNGIPAIEEVNIF 60

Query: 316 KDD 324
           K+D
Sbjct: 61  KED 63


>UniRef50_Q13892 Cluster: Transcription factor BTF3 homolog 3; n=85;
           Fungi/Metazoa group|Rep: Transcription factor BTF3
           homolog 3 - Homo sapiens (Human)
          Length = 214

 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 36/62 (58%), Positives = 39/62 (62%)
 Frame = +1

Query: 148 KLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKDDG 327
           KL KLQ+QVRIGGKGT  RKKKV H TA  DD           VN I GIE+VNM  + G
Sbjct: 40  KLAKLQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQG 99

Query: 328 TV 333
           TV
Sbjct: 100 TV 101


>UniRef50_Q5YET6 Cluster: Transcription factor BTF3; n=1;
           Bigelowiella natans|Rep: Transcription factor BTF3 -
           Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 165

 Score = 60.9 bits (141), Expect = 6e-09
 Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
 Frame = +1

Query: 139 NTEKLKKLQSQ---VRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVN 309
           N +KLK+L S+   VRIGGKG+ RR++K +    + DD           V  IP IEEVN
Sbjct: 4   NPDKLKRLTSKSNSVRIGGKGSIRRRRKTIRKNLSHDDKRLTNTLKRLNVRDIPAIEEVN 63

Query: 310 MIKDDGTV 333
           + KDDGTV
Sbjct: 64  LFKDDGTV 71


>UniRef50_Q2U6N1 Cluster: Nascent polypeptide-associated complex
           subunit beta; n=4; Pezizomycotina|Rep: Nascent
           polypeptide-associated complex subunit beta -
           Aspergillus oryzae
          Length = 196

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 26/59 (44%), Positives = 33/59 (55%)
 Frame = +1

Query: 157 KLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKDDGTV 333
           +L + ++  GKGTPRRK K VH ++  DD           V  I  IEEVNM K+DG V
Sbjct: 49  RLTNSLKNRGKGTPRRKVKKVHKSSGADDKKLQATLKKMNVQPIQAIEEVNMFKEDGNV 107


>UniRef50_Q6A1N2 Cluster: Transcription factor BTF3; n=1; Euplotes
           vannus|Rep: Transcription factor BTF3 - Euplotes vannus
          Length = 157

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 26/60 (43%), Positives = 30/60 (50%)
 Frame = +1

Query: 154 KKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKDDGTV 333
           KKL    +IGGKG  RR KKV       +D           V ++P IEEVN  KDD TV
Sbjct: 16  KKLGGNTKIGGKGGARRTKKVNKKADKNEDKKLKQQLKKFNVQSLPDIEEVNFFKDDDTV 75


>UniRef50_Q54TR8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 142

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +1

Query: 148 KLKKL-QSQVRIGGKGTPRRKKKVVH-VTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKD 321
           +L KL + +VR GGKG+ RRK++V H  T + DD           V  I  +EE N  K 
Sbjct: 7   RLNKLAEERVRTGGKGSMRRKQQVTHKSTTSVDDKKLHVKLANLGVKPIGAVEEANFFKA 66

Query: 322 DGTV 333
           DG +
Sbjct: 67  DGNI 70


>UniRef50_Q6C2F3 Cluster: Nascent polypeptide-associated complex
           subunit beta; n=1; Yarrowia lipolytica|Rep: Nascent
           polypeptide-associated complex subunit beta - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 162

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 29/65 (44%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +1

Query: 148 KLKKLQ--SQVRIGGKGTPRRK-KKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIK 318
           KL  LQ  S  + GGKGTPRR  KKV     + D+              I GI EVNM K
Sbjct: 7   KLAALQKKSGAQSGGKGTPRRPGKKVAGRNISEDEKKLSATLKKFNAQEITGISEVNMFK 66

Query: 319 DDGTV 333
           +DGTV
Sbjct: 67  EDGTV 71


>UniRef50_A0CH86 Cluster: Chromosome undetermined scaffold_18, whole
           genome shotgun sequence; n=4; Oligohymenophorea|Rep:
           Chromosome undetermined scaffold_18, whole genome
           shotgun sequence - Paramecium tetraurelia
          Length = 168

 Score = 39.9 bits (89), Expect = 0.011
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = +1

Query: 139 NTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIK 318
           N +KL +   Q ++G     RRK K VH T   DD           V  +  I+EVN  K
Sbjct: 15  NRKKLAEKFGQTKMGST-LARRKHKNVHQTQINDDKKLKQVIKKFGVQQLGNIDEVNFFK 73

Query: 319 DDGTV 333
           DD T+
Sbjct: 74  DDNTI 78


>UniRef50_Q4UDF4 Cluster: Transcription factor btf3 homolog,
           putative; n=3; Piroplasmida|Rep: Transcription factor
           btf3 homolog, putative - Theileria annulata
          Length = 164

 Score = 39.5 bits (88), Expect = 0.015
 Identities = 22/50 (44%), Positives = 25/50 (50%)
 Frame = +1

Query: 181 GGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKDDGT 330
           GGKGT RRK K        DD              IPGIEEV ++K+DGT
Sbjct: 36  GGKGTARRKLKKT-TKFVGDDKRLQFALRSIGAANIPGIEEVQILKEDGT 84


>UniRef50_UPI000155321F Cluster: PREDICTED: similar to Btf3 protein;
           n=3; Mus musculus|Rep: PREDICTED: similar to Btf3
           protein - Mus musculus
          Length = 260

 Score = 39.1 bits (87), Expect = 0.019
 Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
 Frame = +1

Query: 145 EKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNT----------IPG 294
           +K+ +LQ+QV I GKGT  R KKV H TA+ D             N           + G
Sbjct: 23  KKISRLQAQVLIDGKGTAHR-KKVAHRTASADGKTTTTNNKTKQNNNKKKTVVLLKEVRG 81

Query: 295 IEEVNMIKDDGTV 333
           IEEVN   + GTV
Sbjct: 82  IEEVNTFTNQGTV 94


>UniRef50_Q86NT7 Cluster: AT11810p; n=2; Drosophila
           melanogaster|Rep: AT11810p - Drosophila melanogaster
           (Fruit fly)
          Length = 269

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +1

Query: 136 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNM 312
           M+  K + ++  VRIGGKG+ RRK K +   AA D+           +  I GI E+ +
Sbjct: 1   MDFNKRQNMEEVVRIGGKGSMRRKHKRIPSVAAVDEKRVQATLAKIPLKNISGIHELTI 59


>UniRef50_Q5CX56 Cluster: BTF domain, basal transcription factor;
           n=3; Cryptosporidium|Rep: BTF domain, basal
           transcription factor - Cryptosporidium parvum Iowa II
          Length = 186

 Score = 37.5 bits (83), Expect = 0.059
 Identities = 21/52 (40%), Positives = 25/52 (48%)
 Frame = +1

Query: 175 RIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKDDGT 330
           ++GGKGT RRKK+    T   D              T P I EV M+K DGT
Sbjct: 52  QVGGKGTARRKKRAQKPT-GVDVKKLQAVTSRFRCQTFPAIGEVTMMKKDGT 102


>UniRef50_Q0IGS9 Cluster: RT01104p; n=4; Drosophila
           melanogaster|Rep: RT01104p - Drosophila melanogaster
           (Fruit fly)
          Length = 262

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +1

Query: 136 MNTEKLKKLQSQVRIGGKGTPRRKKK 213
           M+ +KLKK++  VRIGGKG+ RRK K
Sbjct: 1   MDFKKLKKMEEAVRIGGKGSMRRKHK 26


>UniRef50_UPI0000D9B4C6 Cluster: PREDICTED: basic transcription
           factor 3 isoform 1; n=4; Eutheria|Rep: PREDICTED: basic
           transcription factor 3 isoform 1 - Macaca mulatta
          Length = 168

 Score = 35.1 bits (77), Expect = 0.31
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +1

Query: 133 IMNTEKLKKLQSQVRIGGK 189
           IMN EKL KLQ+QVRIGGK
Sbjct: 49  IMNQEKLAKLQAQVRIGGK 67


>UniRef50_Q9VY38 Cluster: CG18157-PA; n=1; Drosophila
           melanogaster|Rep: CG18157-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 197

 Score = 35.1 bits (77), Expect = 0.31
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = +1

Query: 136 MNTEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 315
           M+ + LKK++  VRIGG G+ RRK K +    A D+           +  +  I+E+ + 
Sbjct: 1   MDFKTLKKMEEAVRIGGNGSMRRKHKKIPSLNADDEKRVRAALAMLPLKNLGEIQEMTIK 60

Query: 316 KDDGT 330
             D +
Sbjct: 61  FSDSS 65


>UniRef50_Q751F1 Cluster: Nascent polypeptide-associated complex
           subunit beta; n=4; Saccharomycetales|Rep: Nascent
           polypeptide-associated complex subunit beta - Ashbya
           gossypii (Yeast) (Eremothecium gossypii)
          Length = 161

 Score = 33.9 bits (74), Expect = 0.72
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 136 MNTEKLKKLQSQVRIGGKGTPRRK--KKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVN 309
           ++ EKL KLQ        G  RRK  KK    +A  DD             T+  +EE N
Sbjct: 3   IDQEKLAKLQKLSANNKVGGTRRKLAKKSGTASANKDDSKLQAQLAKLKAVTMDQVEEAN 62

Query: 310 MIKDDGTV 333
             KDDG+V
Sbjct: 63  FFKDDGSV 70


>UniRef50_Q73RD7 Cluster: Amino acid permease family protein; n=1;
           Treponema denticola|Rep: Amino acid permease family
           protein - Treponema denticola
          Length = 451

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -3

Query: 317 FIILTSSMPGMVFTDNFLRDDCNFLSSVAAVTCTTFFLRLGVPLPPMRTCDCSF 156
           FIIL  S    VF+DN+L  D   L+  A++     FL +G  + P  +CD  F
Sbjct: 185 FIILGKSNL-KVFSDNYLGYDKISLAKTASIIAIIPFLFVGFDVVPQVSCDLGF 237


>UniRef50_Q0C9U9 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus terreus NIH2624|Rep: Putative
           uncharacterized protein - Aspergillus terreus (strain
           NIH 2624)
          Length = 459

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -1

Query: 211 SSCASVYPYRRCAPATVVSLAFP--YSLCYFN 122
           SS +SV P    AP+T VS  FP  YS CY N
Sbjct: 260 SSASSVSPTMPTAPSTTVSTYFPLYYSACYDN 291


>UniRef50_UPI0000F2C851 Cluster: PREDICTED: similar to BTF3a; n=1;
           Monodelphis domestica|Rep: PREDICTED: similar to BTF3a -
           Monodelphis domestica
          Length = 131

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +1

Query: 178 IGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKDDGTV 333
           IGGK    RKKKV+  T + D            VN     EEV +  + GT+
Sbjct: 40  IGGKRATWRKKKVIPRTVSADYEKLQISLKKREVNNTSVTEEVTVFNNLGTI 91


>UniRef50_Q01LQ4 Cluster: OSIGBa0135K14.8 protein; n=7; Oryza
           sativa|Rep: OSIGBa0135K14.8 protein - Oryza sativa
           (Rice)
          Length = 747

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -1

Query: 202 ASVYPYRRCAPATVVS-LAFPYSLCYFNVLKFSTDTRST 89
           +S+Y + RCA A +V   +F +S+ Y +  KF++DT S+
Sbjct: 182 SSMYTWNRCAYAALVEESSFNFSMIYDSSSKFNSDTVSS 220


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,234,362
Number of Sequences: 1657284
Number of extensions: 5090816
Number of successful extensions: 9426
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9413
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -