Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D18
         (274 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   1.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   1.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   1.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   2.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   2.3  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    20   5.4  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    19   7.2  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    19   7.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    19   7.2  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -1

Query: 154 NKRLKQKSRYFTQDIPP-PIA 95
           N+R+KQK R     IPP PI+
Sbjct: 303 NRRMKQKKRMKEGLIPPEPIS 323


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -1

Query: 154 NKRLKQKSRYFTQDIPP-PIA 95
           N+R+KQK R     IPP PI+
Sbjct: 92  NRRMKQKKRMKEGLIPPEPIS 112


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -1

Query: 154 NKRLKQKSRYFTQDIPP-PIA 95
           N+R+KQK R     IPP PI+
Sbjct: 92  NRRMKQKKRMKEGLIPPEPIS 112


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 2.3
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 45  NVWRL*VYNNRKADWKMAIGGGMSCVKYLLFCFNLL 152
           N W++ V +    D K+  GG +       FCF  +
Sbjct: 499 NTWKMLVKSFDAIDSKLQTGGKVETSICKNFCFGFI 534


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 2.3
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 10  SV*SCFI*TQ*ITFGDYKFIIIEKQIGK 93
           +V  C++ T+ +     +F+I+ KQ+ K
Sbjct: 177 NVAQCYLTTELVLMLQTRFVILNKQLTK 204


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 5.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 115 DIPPPIAIFQSAFL 74
           D PPPI  F+++ L
Sbjct: 152 DAPPPITSFETSGL 165


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
          protein 1 protein.
          Length = 112

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 51 KRYLLRLNKTRSNRASC 1
          +RYLLR  K  +  A C
Sbjct: 42 RRYLLRQLKCATGEAPC 58


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +2

Query: 116 LREVPTFLFQSFICDYGIDNLD 181
           LR+       SFI  YG D  D
Sbjct: 119 LRQAMVTSVLSFIDQYGFDGFD 140


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +2

Query: 116 LREVPTFLFQSFICDYGIDNLD 181
           LR+       SFI  YG D  D
Sbjct: 119 LRQAMVTSVLSFIDQYGFDGFD 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,954
Number of Sequences: 336
Number of extensions: 1260
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4471194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)