Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D18
         (274 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   0.67 
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    24   0.89 

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = +3

Query: 12  GLIVFYLDAIDNVWRL*VYNNRKADWKMAIGGGMSCVKYLLFCFNLLFAITGLI 173
           GLI+F L     +W   +  N++  W++  GG     +Y++    +    TG +
Sbjct: 408 GLILFLLGMWMVLWEKTLDKNKEEIWQLFFGG-----RYIILLMGIFSMYTGFV 456


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 156 AITGLIILIVGIKAEINSSPYIDLTDENFYTSG 254
           AI  L++++  +   INS PY+ L+ E   T G
Sbjct: 94  AIADLLVMLDYMPYAINSIPYLRLSREERLTYG 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,840
Number of Sequences: 2352
Number of extensions: 4743
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15730956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)