Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D17
         (416 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   2.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   2.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   4.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   4.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   4.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    20   8.4  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 164 LTRNHNYFRKLKVA*V*IFFNCFCFRYRIYI 256
           + +NHN  R+     + +  NCF + Y+ Y+
Sbjct: 102 MVQNHNNIREKSHYCLFVASNCFFWSYQSYM 132


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 164 LTRNHNYFRKLKVA*V*IFFNCFCFRYRIYI 256
           + +NHN  R+     + +  NCF + Y+ Y+
Sbjct: 102 MVQNHNNIREKSHYCLFVASNCFFWSYQSYM 132


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 366 NMSITHKNETIGKQ 407
           N  + HK +T+GKQ
Sbjct: 54  NRRMKHKRQTLGKQ 67


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 366 NMSITHKNETIGKQ 407
           N  + HK +T+GKQ
Sbjct: 2   NRRMKHKRQTLGKQ 15


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 366 NMSITHKNETIGKQ 407
           N  + HK +T+GKQ
Sbjct: 185 NRRMKHKRQTLGKQ 198


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 45  LFFFCFK*DKVKIFLINS 98
           LFFF F+  K + FLI++
Sbjct: 222 LFFFRFEKSKFEPFLISN 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,770
Number of Sequences: 336
Number of extensions: 1664
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)