Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D16
         (489 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF465821-1|AAL77003.1|  247|Homo sapiens unknown protein protein.      30   4.9  
BC034571-1|AAH34571.1|  216|Homo sapiens PLA2G4D protein protein.      29   6.5  

>AF465821-1|AAL77003.1|  247|Homo sapiens unknown protein protein.
          Length = 247

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +1

Query: 286 LSGNGQPEVRATLVTLVPYVAEHSPPKYGEAVKALPVNSCS*V*KKLQKIIYV 444
           LSG+  PE   +LV  +    EH     GE  KA P          L+K+++V
Sbjct: 189 LSGDAPPEDNKSLVVSLSKAREHGAGSLGEQFKASPTKPLVPSEAHLEKVLHV 241


>BC034571-1|AAH34571.1|  216|Homo sapiens PLA2G4D protein protein.
          Length = 216

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 39  HPSAAETAFPAAGDRRLTLLPHTLRIPLRRRPI 137
           +PSA     P A  R    LPHT R+P  RR +
Sbjct: 182 NPSAQPGQAPEASSRATEPLPHTARVPKGRRGV 214


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,510,939
Number of Sequences: 237096
Number of extensions: 1741173
Number of successful extensions: 3501
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3501
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)