Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D15
(380 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.19
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.19
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.19
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.19
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 24 0.59
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 23 0.78
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 21 4.2
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 21 4.2
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 5.5
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 20 9.6
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 20 9.6
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 20 9.6
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 20 9.6
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 20 9.6
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.19
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 358 MPDLLHIVPVGDDAVFD 308
+PD+ I+P GDD D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.19
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 358 MPDLLHIVPVGDDAVFD 308
+PD+ I+P GDD D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.19
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 358 MPDLLHIVPVGDDAVFD 308
+PD+ I+P GDD D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.19
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 358 MPDLLHIVPVGDDAVFD 308
+PD+ I+P GDD D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 23.8 bits (49), Expect = 0.59
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 217 VTRSPHDRGKYGAGSVVSRETGFAHSGPIVYDQRGNFLVAHCEL 86
+T S DR KYG + ++ E GF + Y+ R + HC +
Sbjct: 60 ITTSDRDRSKYGMLARLAVEAGFDW---VYYESRAHI---HCSV 97
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 23.4 bits (48), Expect = 0.78
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 36 NRCGYCQFSRYLN 74
NRC YC++ + LN
Sbjct: 136 NRCQYCRYQKCLN 148
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 21.0 bits (42), Expect = 4.2
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3
Query: 141 ECAKPVSRETTLPAP 185
+CAKP+++ +P P
Sbjct: 272 DCAKPLTQIRNIPGP 286
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 21.0 bits (42), Expect = 4.2
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3
Query: 141 ECAKPVSRETTLPAP 185
+CAKP+++ +P P
Sbjct: 272 DCAKPLTQIRNIPGP 286
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 20.6 bits (41), Expect = 5.5
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 29 GLEPLRILSIFT-LSKLPTD*FTMCDEEVA 115
G++ IF LS LP D F EEVA
Sbjct: 238 GMQTTNEKEIFERLSILPVDEFLQISEEVA 267
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 19.8 bits (39), Expect = 9.6
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +1
Query: 280 EGYPHTQIPH 309
EG PH +PH
Sbjct: 487 EGNPHCWVPH 496
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 19.8 bits (39), Expect = 9.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 19 HFSRFGTAADIVNFHVI*ITYRLI 90
HFS D+V V+ + +RL+
Sbjct: 633 HFSEADFVMDVVMLAVLIVGFRLV 656
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 19.8 bits (39), Expect = 9.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 19 HFSRFGTAADIVNFHVI*ITYRLI 90
HFS D+V V+ + +RL+
Sbjct: 633 HFSEADFVMDVVMLAVLIVGFRLV 656
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 19.8 bits (39), Expect = 9.6
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 156 PALHIPDPLSTTNAATSSSHIVN*SVGNLDNVKIDNI 46
PAL P+ LS + A S + GN+ +++ N+
Sbjct: 461 PALSTPNLLSLSLAFNSLPTVALEVAGNISSLRYLNL 497
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 19.8 bits (39), Expect = 9.6
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2
Query: 161 AGDDAPRAVFPSIVGRPRHQGVMVG 235
AG +PR + RP HQ G
Sbjct: 62 AGFPSPRGALGAYPFRPMHQNSYTG 86
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,600
Number of Sequences: 336
Number of extensions: 1937
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 7908675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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