Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D15
(380 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 186 6e-48
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 186 6e-48
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 185 8e-48
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 185 8e-48
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 185 8e-48
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 185 8e-48
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 181 2e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 181 2e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 181 2e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 175 6e-45
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 124 3e-29
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 97 3e-21
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 91 2e-19
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 76 7e-15
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 70 5e-13
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 60 6e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 45 2e-05
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 42 1e-04
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 40 7e-04
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,... 32 0.11
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 31 0.34
At4g24680.1 68417.m03533 expressed protein 28 1.8
At2g33280.1 68415.m04079 integral membrane transporter family pr... 28 2.4
At3g05750.1 68416.m00646 expressed protein 27 3.2
At5g66890.1 68418.m08432 disease resistance protein (CC-NBS-LRR ... 27 5.6
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 5.6
At3g48860.2 68416.m05337 expressed protein 26 7.4
At3g48860.1 68416.m05336 expressed protein 26 7.4
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 26 7.4
At2g44130.1 68415.m05489 kelch repeat-containing F-box family pr... 26 7.4
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 7.4
At1g16690.2 68414.m01999 transcription factor-related similar to... 26 7.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 26 7.4
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 26 9.7
At3g19680.1 68416.m02493 expressed protein 26 9.7
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 26 9.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 6e-48
Identities = 82/92 (89%), Positives = 87/92 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNEL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL 96
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 6e-48
Identities = 82/92 (89%), Positives = 87/92 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNEL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL 96
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 8e-48
Identities = 82/92 (89%), Positives = 86/92 (93%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
GILTLKYPIEHGIV NWDDMEKIWHHTFYNEL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 185 bits (451), Expect = 8e-48
Identities = 82/92 (89%), Positives = 86/92 (93%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
GILTLKYPIEHGIV NWDDMEKIWHHTFYNEL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 8e-48
Identities = 82/92 (89%), Positives = 86/92 (93%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
GILTLKYPIEHGIV NWDDMEKIWHHTFYNEL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 8e-48
Identities = 82/92 (89%), Positives = 86/92 (93%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
GILTLKYPIEHGIV NWDDMEKIWHHTFYNEL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 181 bits (440), Expect = 2e-46
Identities = 77/92 (83%), Positives = 86/92 (93%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNEL
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 181 bits (440), Expect = 2e-46
Identities = 77/92 (83%), Positives = 86/92 (93%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNEL
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 181 bits (440), Expect = 2e-46
Identities = 77/92 (83%), Positives = 86/92 (93%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNEL
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 175 bits (427), Expect = 6e-45
Identities = 74/92 (80%), Positives = 87/92 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNEL
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNEL 97
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 124 bits (298), Expect = 3e-29
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 299 KYPIEHGIVTNWDDMEKIWHHTFYNEL 379
K P+EHGIV NWDDMEKIWH+TFYNEL
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNEL 85
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 97.5 bits (232), Expect = 3e-21
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 292
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 293 TLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
+ YP+ +GIV NWDDME +W H FYNEL
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNEL 95
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 91.1 bits (216), Expect = 2e-19
Identities = 35/51 (68%), Positives = 46/51 (90%)
Frame = +2
Query: 227 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+EL
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSEL 51
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 76.2 bits (179), Expect = 7e-15
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 16/106 (15%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 238
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 239 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 373
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRN 110
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 70.1 bits (164), Expect = 5e-13
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 22/110 (20%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 253
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 254 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTF 367
YVG +A S +R + + PI+ GIV++WD ++ IW H F
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAF 114
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 59.7 bits (138), Expect = 6e-10
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 21/109 (19%)
Frame = +2
Query: 116 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 241
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 242 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N L
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYL 113
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.8 bits (101), Expect = 2e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 299 -----KYPIEHGIVTNWDDMEKIWHHTF 367
+ P + +V ++ ME I + F
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAF 105
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 299 KYPIEHGIVTNWDDMEKIWHHTF 367
+ PI+ G + N D +IW H F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLF 84
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 39.5 bits (88), Expect = 7e-04
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 116 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 292
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 293 TLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
TL PIE G++ +WD ME + + Y L
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGL 81
>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 724
Score = 32.3 bits (70), Expect = 0.11
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 111 LPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWSAWVRRTPT 257
LP WS ++ P+C V + AP R+ T+ SW ++ TPT
Sbjct: 396 LPPWSVSILPDCKTEVYNTAKVNAPSVHRNMVPTGTKFSWGSFNEATPT 444
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.7 bits (66), Expect = 0.34
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -3
Query: 240 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 103
P P + P RG +G T+ +SSPA+P + +P+ +ST + TS+
Sbjct: 290 PTPDIKPT-RGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At4g24680.1 68417.m03533 expressed protein
Length = 1480
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 211 SSPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRHQLGRYGEDLA 357
S G + GS L R E TQ P++ +HQ GR+GED A
Sbjct: 477 SGQGGYDTPGSSVSLER---NESSHSQETQRPYKVLLKHQDGRFGEDNA 522
>At2g33280.1 68415.m04079 integral membrane transporter family
protein contains 9 transmembrane domains; contains Pfam
PF03092: BT1 family; contains TIGRFAMS TIGR00788:
folate/biopterin transporter
Length = 408
Score = 27.9 bits (59), Expect = 2.4
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = -2
Query: 349 LLHIVPVGDDAVFDGVFECEDTPLALCLITYVGVLLTHADHDALVTRSPHDRGKYGAGSV 170
LL + G A+F G E + +A L++ +G +T DALV +YG
Sbjct: 30 LLQGLAWGSLAIFPGAREVLPSLMAFILLSNLGASITEVSQDALV-------AEYGLRYQ 82
Query: 169 VSRETGFAHSGPIVYDQRGNFLVAHCEL 86
++ +A V GN L +C L
Sbjct: 83 INGLQSYALMASAVGGILGNLLGGYCLL 110
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 280
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 281 RG--ILTLKYPIEHGIVTNWDDMEK 349
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At5g66890.1 68418.m08432 disease resistance protein (CC-NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 415
Score = 26.6 bits (56), Expect = 5.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 20 ISHGLEPLRILSIFTLSKLP 79
I+HGLEP ++ ++ LS LP
Sbjct: 186 INHGLEPAKLTNLSCLSSLP 205
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 26.6 bits (56), Expect = 5.6
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 68 SKLPTD*FTMCDEEVA-ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ 244
S L TD D + + ALV +C FAGD A AV SI G G+ G
Sbjct: 20 SNLNTDGDEATDNDSSKALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGF 77
Query: 245 KDSYVGDEAQSKRGILTL 298
K S+ D QS + L
Sbjct: 78 KGSF-ADAGQSAKTFAVL 94
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 195 EGNTARGASSPAKPALHIPDPLSTTNAATSSSH 97
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 195 EGNTARGASSPAKPALHIPDPLSTTNAATSSSH 97
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 277 ALCLITYVGVLLTHADHDALVTRSPHDRGKYGAGSVVSRETGF 149
A+ LIT + +LL + ++ + H+ G+ ++ +ETGF
Sbjct: 131 AITLITLIPLLLKVKVREFMLKKKAHELGREVGLILIKKETGF 173
>At2g44130.1 68415.m05489 kelch repeat-containing F-box family
protein very low similarity to SP|Q9ER30 Kelch-related
protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 409
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = +2
Query: 182 AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 355
+V P GR QG VGMG + + +G I +W ++ +W
Sbjct: 230 SVTPMTEGRDECQGFAVGMGLRFCVLSGYGTESQGRFRSDGEIYDPATDSWSRIDNVW 287
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 229
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +2
Query: 263 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
D A L++KY + H I + W + +IW L
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRL 207
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +2
Query: 263 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 379
D A L++KY + H I + W + +IW L
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRL 207
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 257 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 373
+G+E SK+ I+ ++ ++ + W+D+ K H N
Sbjct: 187 LGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225
>At3g19680.1 68416.m02493 expressed protein
Length = 491
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 120 WS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWSAWVRRTP 254
WS T+ PV+ ++ P+ P + VTR+S AW+ P
Sbjct: 265 WSITVHDLSGSPVAM-ASMVTPFVPSPGSNRVTRSSPGAWLILRP 308
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 311 EHGIVTNWDDMEKIWHHTFY 370
EHGI +D EK+W F+
Sbjct: 234 EHGIDRTYDVAEKVWAEVFF 253
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,946,896
Number of Sequences: 28952
Number of extensions: 191360
Number of successful extensions: 542
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 527724392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -