Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D14
         (421 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X53777-1|CAA37793.1|  184|Homo sapiens protein ( Human L23 mRNA ...   167   2e-41
BC106031-1|AAI06032.1|  184|Homo sapiens ribosomal protein L17 p...   167   2e-41
BC066323-1|AAH66323.1|  184|Homo sapiens ribosomal protein L17 p...   167   2e-41
BC017831-1|AAH17831.1|  184|Homo sapiens ribosomal protein L17 p...   167   2e-41
BC000502-1|AAH00502.1|  184|Homo sapiens ribosomal protein L17 p...   167   2e-41
AB061824-1|BAB79462.1|  184|Homo sapiens ribosomal protein L17 p...   167   2e-41
BC066324-1|AAH66324.1|  184|Homo sapiens ribosomal protein L17 p...   163   2e-40
AK130593-1|BAC85391.1|  136|Homo sapiens protein ( Homo sapiens ...    77   3e-14

>X53777-1|CAA37793.1|  184|Homo sapiens protein ( Human L23 mRNA for
           putative ribosomal protein. ).
          Length = 184

 Score =  167 bits (405), Expect = 2e-41
 Identities = 74/90 (82%), Positives = 84/90 (93%)
 Frame = -3

Query: 419 RFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNR 240
           R+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ KGLDVD LVI+HIQVN+
Sbjct: 62  RYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNK 121

Query: 239 APCLRRRTYRAHGRINPYMSSPCHIEVCLS 150
           AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 122 APKMRRRTYRAHGRINPYMSSPCHIEMILT 151


>BC106031-1|AAI06032.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score =  167 bits (405), Expect = 2e-41
 Identities = 74/90 (82%), Positives = 84/90 (93%)
 Frame = -3

Query: 419 RFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNR 240
           R+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ KGLDVD LVI+HIQVN+
Sbjct: 62  RYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNK 121

Query: 239 APCLRRRTYRAHGRINPYMSSPCHIEVCLS 150
           AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 122 APKMRRRTYRAHGRINPYMSSPCHIEMILT 151


>BC066323-1|AAH66323.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score =  167 bits (405), Expect = 2e-41
 Identities = 74/90 (82%), Positives = 84/90 (93%)
 Frame = -3

Query: 419 RFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNR 240
           R+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ KGLDVD LVI+HIQVN+
Sbjct: 62  RYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNK 121

Query: 239 APCLRRRTYRAHGRINPYMSSPCHIEVCLS 150
           AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 122 APKMRRRTYRAHGRINPYMSSPCHIEMILT 151


>BC017831-1|AAH17831.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score =  167 bits (405), Expect = 2e-41
 Identities = 74/90 (82%), Positives = 84/90 (93%)
 Frame = -3

Query: 419 RFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNR 240
           R+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ KGLDVD LVI+HIQVN+
Sbjct: 62  RYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNK 121

Query: 239 APCLRRRTYRAHGRINPYMSSPCHIEVCLS 150
           AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 122 APKMRRRTYRAHGRINPYMSSPCHIEMILT 151


>BC000502-1|AAH00502.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score =  167 bits (405), Expect = 2e-41
 Identities = 74/90 (82%), Positives = 84/90 (93%)
 Frame = -3

Query: 419 RFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNR 240
           R+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ KGLDVD LVI+HIQVN+
Sbjct: 62  RYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNK 121

Query: 239 APCLRRRTYRAHGRINPYMSSPCHIEVCLS 150
           AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 122 APKMRRRTYRAHGRINPYMSSPCHIEMILT 151


>AB061824-1|BAB79462.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score =  167 bits (405), Expect = 2e-41
 Identities = 74/90 (82%), Positives = 84/90 (93%)
 Frame = -3

Query: 419 RFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNR 240
           R+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ KGLDVD LVI+HIQVN+
Sbjct: 62  RYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNK 121

Query: 239 APCLRRRTYRAHGRINPYMSSPCHIEVCLS 150
           AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 122 APKMRRRTYRAHGRINPYMSSPCHIEMILT 151


>BC066324-1|AAH66324.1|  184|Homo sapiens ribosomal protein L17
           protein.
          Length = 184

 Score =  163 bits (397), Expect = 2e-40
 Identities = 73/90 (81%), Positives = 83/90 (92%)
 Frame = -3

Query: 419 RFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNR 240
           R+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ KGLDVD LVI+HIQVN+
Sbjct: 62  RYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNK 121

Query: 239 APCLRRRTYRAHGRINPYMSSPCHIEVCLS 150
           AP +RRRTYRA GRINPYMSSPCHIE+ L+
Sbjct: 122 APKMRRRTYRARGRINPYMSSPCHIEMILT 151


>AK130593-1|BAC85391.1|  136|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27083 fis, clone SPL03425. ).
          Length = 136

 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 35/68 (51%), Positives = 50/68 (73%)
 Frame = -3

Query: 353 PKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 174
           PK+   F    L+  +SNA++K LD+D L+I+ IQVN+AP +   TYRAHG+INPY++S 
Sbjct: 21  PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSA 79

Query: 173 CHIEVCLS 150
           CHIE+ L+
Sbjct: 80  CHIEMILT 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,552,854
Number of Sequences: 237096
Number of extensions: 757001
Number of successful extensions: 1493
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)