Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D13
         (485 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   4.5  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 199 TNLCICFHFLSLDFRLNH 252
           TN  +C+H +   +RLN+
Sbjct: 19  TNKVVCYHGIWSTYRLNN 36


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 43   PCPCTNAVCSPVALSPGS*SSYP 111
            P   T +V +  + +PGS ++YP
Sbjct: 1345 PAQSTTSVSTTTSWNPGSTTNYP 1367



 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 73  ANKLRWYKDMVSSSSATCGPR 11
           AN LR Y+D++   +   GP+
Sbjct: 618 ANSLRQYEDLLEYEAKEEGPK 638


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 177 KYVMFFFYKFVHLFSF 224
           KY  +F   + HLF+F
Sbjct: 345 KYTTYFLNTYPHLFNF 360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,831
Number of Sequences: 336
Number of extensions: 2096
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)