Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D13
         (485 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126987-1|AAI26988.1|  305|Homo sapiens FLJ37440 protein protein.     31   1.6  
BC126986-1|AAI26987.1|  393|Homo sapiens FLJ37440 protein protein.     31   1.6  
BC038242-1|AAH38242.1|  261|Homo sapiens Similar to RIKEN cDNA 1...    31   1.6  
BC035784-1|AAH35784.1|  439|Homo sapiens hypothetical protein FL...    31   1.6  
AK094759-1|BAC04416.1|  439|Homo sapiens protein ( Homo sapiens ...    31   1.6  
AC092645-2|AAY14854.1|  439|Homo sapiens unknown protein.              31   1.6  

>BC126987-1|AAI26988.1|  305|Homo sapiens FLJ37440 protein protein.
          Length = 305

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 15  GPQVAELELTMSLYQRSLFAGSAVARLIVIVSEYDY 122
           GPQ  E+++ MS Y    F  + V+++ + VS YD+
Sbjct: 270 GPQTLEVDVDMSEYLDRSFQANHVSKVTIFVSPYDF 305


>BC126986-1|AAI26987.1|  393|Homo sapiens FLJ37440 protein protein.
          Length = 393

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 15  GPQVAELELTMSLYQRSLFAGSAVARLIVIVSEYDY 122
           GPQ  E+++ MS Y    F  + V+++ + VS YD+
Sbjct: 358 GPQTLEVDVDMSEYLDRSFQANHVSKVTIFVSPYDF 393


>BC038242-1|AAH38242.1|  261|Homo sapiens Similar to RIKEN cDNA
           1600015H20 gene protein.
          Length = 261

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 15  GPQVAELELTMSLYQRSLFAGSAVARLIVIVSEYDY 122
           GPQ  E+++ MS Y    F  + V+++ + VS YD+
Sbjct: 226 GPQTLEVDVDMSEYLDRSFQANHVSKVTIFVSPYDF 261


>BC035784-1|AAH35784.1|  439|Homo sapiens hypothetical protein
           FLJ37440 protein.
          Length = 439

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 15  GPQVAELELTMSLYQRSLFAGSAVARLIVIVSEYDY 122
           GPQ  E+++ MS Y    F  + V+++ + VS YD+
Sbjct: 404 GPQTLEVDVDMSEYLDRSFQANHVSKVTIFVSPYDF 439


>AK094759-1|BAC04416.1|  439|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37440 fis, clone BRAWH2006405, weakly similar to
           FIBULIN-1, ISOFORM C PRECURSOR. ).
          Length = 439

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 15  GPQVAELELTMSLYQRSLFAGSAVARLIVIVSEYDY 122
           GPQ  E+++ MS Y    F  + V+++ + VS YD+
Sbjct: 404 GPQTLEVDVDMSEYLDRSFQANHVSKVTIFVSPYDF 439


>AC092645-2|AAY14854.1|  439|Homo sapiens unknown protein.
          Length = 439

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 15  GPQVAELELTMSLYQRSLFAGSAVARLIVIVSEYDY 122
           GPQ  E+++ MS Y    F  + V+++ + VS YD+
Sbjct: 404 GPQTLEVDVDMSEYLDRSFQANHVSKVTIFVSPYDF 439


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,561,245
Number of Sequences: 237096
Number of extensions: 1084840
Number of successful extensions: 1172
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)