Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D13
         (485 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003472-1|AAO39475.1|  917|Drosophila melanogaster RE68558p pro...    37   0.013
AE014135-43|AAF59360.3|  917|Drosophila melanogaster CG31999-PA ...    37   0.013
AE014298-2667|AAF48801.1|  417|Drosophila melanogaster CG7135-PA...    28   5.9  

>BT003472-1|AAO39475.1|  917|Drosophila melanogaster RE68558p
           protein.
          Length = 917

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +3

Query: 6   SARGPQVAELELTMSLYQRSLFAGSAVARLIVIVSEYDY 122
           S  GPQ  ELEL+M++Y   +  G +VA+L + VS++ +
Sbjct: 879 SLEGPQDIELELSMTVYTNGMPRGKSVAKLFLFVSQHTF 917


>AE014135-43|AAF59360.3|  917|Drosophila melanogaster CG31999-PA
           protein.
          Length = 917

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +3

Query: 6   SARGPQVAELELTMSLYQRSLFAGSAVARLIVIVSEYDY 122
           S  GPQ  ELEL+M++Y   +  G +VA+L + VS++ +
Sbjct: 879 SLEGPQDIELELSMTVYTNGMPRGKSVAKLFLFVSQHTF 917


>AE014298-2667|AAF48801.1|  417|Drosophila melanogaster CG7135-PA
           protein.
          Length = 417

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 238 NLTRGNENKCTNL*KKNITY 179
           NLTRG EN C+N+ +  I Y
Sbjct: 39  NLTRGGENYCSNIYRAQIKY 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,212,154
Number of Sequences: 53049
Number of extensions: 323198
Number of successful extensions: 404
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)