Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D09
         (512 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)                 30   0.97 
SB_76| Best HMM Match : No HMM Matches (HMM E-Value=.)                 29   2.2  

>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
          Length = 407

 Score = 30.3 bits (65), Expect = 0.97
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1

Query: 509 NASQLKMKRRSK*SRMVTESPQ*KDIRARHSSACSVSRNVTRW 381
           N  +L  K R +    V E P  K+I A+H+  CSV+R + RW
Sbjct: 300 NPGRLVPKERLEREPKVMEEPVIKEIAAKHN--CSVARVLLRW 340


>SB_76| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 426

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -3

Query: 174 NHRAIDGPNTIR*RSSLIREVKILSIMMMLAKKPKK-KSLY 55
           N+ ++ GP+ +  R+ +I E+  L ++ +   KPKK  SLY
Sbjct: 303 NNESVPGPSGLNNRNGVILELTSLKVIELKVDKPKKCPSLY 343


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,247,630
Number of Sequences: 59808
Number of extensions: 214317
Number of successful extensions: 437
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)