Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D09
         (512 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031687-1|CAB51587.2|  828|Homo sapiens cadherin-like 22 protein.     29   7.2  
AF035300-1|AAB88183.1|  380|Homo sapiens protein ( Homo sapiens ...    29   7.2  

>AL031687-1|CAB51587.2|  828|Homo sapiens cadherin-like 22 protein.
          Length = 828

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
 Frame = -2

Query: 439 KTYARDIAP-PAASLGTLHDGSSGT-RDF 359
           +TYA + A  PAASL +LH GSSG+ +DF
Sbjct: 771 QTYAFEGADSPAASLSSLHSGSSGSEQDF 799


>AF035300-1|AAB88183.1|  380|Homo sapiens protein ( Homo sapiens
           clone 23663 mRNA, partial cds. ).
          Length = 380

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
 Frame = -2

Query: 439 KTYARDIAP-PAASLGTLHDGSSGT-RDF 359
           +TYA + A  PAASL +LH GSSG+ +DF
Sbjct: 323 QTYAFEGADSPAASLSSLHSGSSGSEQDF 351


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,044,085
Number of Sequences: 237096
Number of extensions: 1037130
Number of successful extensions: 1568
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)