Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D08
         (479 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   215   9e-58
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           31   0.021
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        31   0.021
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.58 
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       23   7.2  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  215 bits (524), Expect = 9e-58
 Identities = 104/140 (74%), Positives = 119/140 (85%)
 Frame = +3

Query: 60  IVDPFTRLKTGTMLKRRSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSD 239
           +VDPFTR K    +K  +MF  RQ G TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + D
Sbjct: 21  VVDPFTR-KDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPD 79

Query: 240 AERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVETTDGYVLR 419
           AERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MV KWQTLIE ++DV+TTDG++LR
Sbjct: 80  AERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLR 139

Query: 420 VFCIGFTNKDTLSQRKTCYA 479
           VFCIGFT KD++SQRKTCYA
Sbjct: 140 VFCIGFTIKDSMSQRKTCYA 159


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 31.1 bits (67), Expect = 0.021
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 207 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 368
           V+LA+L A SD             D+QG+ V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 31.1 bits (67), Expect = 0.021
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 207 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 368
           V+LA+L A SD             D+QG+ V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.58
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +1

Query: 85   RLVRC*SAGPCSPRDKWAPPLSIAPRE 165
            RL  C  A    P D W PP    P+E
Sbjct: 1734 RLGDCMIAAKFEPHDNWLPPCYYVPKE 1760


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 261 TCGKTFPHHYQPGDQQGRPQKHAPLDP 181
           T G+T+ HHY P   +   Q  A  +P
Sbjct: 32  TMGETWLHHYTPESNRQSAQWTATGEP 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,066
Number of Sequences: 2352
Number of extensions: 10401
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)