Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D07
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    27   0.12 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   4.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   4.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.2  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -1

Query: 189 YSCDPTIRR-FHSVLPVQRVYQACHNNGLDHTARGQQGCILSGNHRKPFFLTNL--SNTI 19
           Y C+ TI   FHSVLP++R + +      D+  +    C + G H   FFL     + T 
Sbjct: 155 YVCNTTIFLIFHSVLPIKRFFTSL-GIAFDNIMKNLI-CEIDGRHE--FFLAEFKSAKTP 210

Query: 18  ENRPSC 1
            N+ +C
Sbjct: 211 PNKLNC 216


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 373 GVIQQSIY-LYMRILLYKILLVCLMYTSVTAIKL 471
           GV+    Y L++  +LY +LL  L Y     IKL
Sbjct: 162 GVVTLQAYTLHLFCVLYVVLLHFLTYNLSLGIKL 195


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 373 GVIQQSIY-LYMRILLYKILLVCLMYTSVTAIKL 471
           GV+    Y L++  +LY +LL  L Y     IKL
Sbjct: 162 GVVTLQAYTLHLFCVLYVVLLHFLTYNLSLGIKL 195


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 160 SFSFTCPKGVSGL 122
           S++ TCP G SG+
Sbjct: 6   SYTCTCPLGFSGI 18


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 239 PPPPGSAASAHNS*RSLTPATQP 171
           PP P SAA+  +S    +PA  P
Sbjct: 12  PPAPQSAATPISSSGMTSPAAAP 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,675
Number of Sequences: 336
Number of extensions: 2813
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)