Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D07
(498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542155-1|CAG46952.1| 94|Homo sapiens ATP5J2 protein. 59 7e-09
CR456891-1|CAG33172.1| 94|Homo sapiens ATP5J2 protein. 59 7e-09
AY046911-1|AAL06647.1| 88|Homo sapiens F1Fo-ATP synthase compl... 59 7e-09
AF088918-1|AAC34895.1| 94|Homo sapiens F1F0-type ATPase subuni... 59 7e-09
AK223348-1|BAD97068.1| 94|Homo sapiens ATP synthase, H+ transp... 59 1e-08
BC003678-1|AAH03678.1| 94|Homo sapiens ATP synthase, H+ transp... 58 2e-08
AL834261-1|CAD38936.1| 377|Homo sapiens hypothetical protein pr... 30 5.1
BC142702-1|AAI42703.1| 355|Homo sapiens vacuolar protein sortin... 29 9.0
BC141827-1|AAI41828.1| 355|Homo sapiens vacuolar protein sortin... 29 9.0
>CR542155-1|CAG46952.1| 94|Homo sapiens ATP5J2 protein.
Length = 94
Score = 59.3 bits (137), Expect = 7e-09
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +3
Query: 144 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 323
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 20 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 324 INYGKMKHHRNYKYH 368
+Y +KH R KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>CR456891-1|CAG33172.1| 94|Homo sapiens ATP5J2 protein.
Length = 94
Score = 59.3 bits (137), Expect = 7e-09
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +3
Query: 144 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 323
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 20 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 324 INYGKMKHHRNYKYH 368
+Y +KH R KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>AY046911-1|AAL06647.1| 88|Homo sapiens F1Fo-ATP synthase complex
Fo membrane domain f subunit protein.
Length = 88
Score = 59.3 bits (137), Expect = 7e-09
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +3
Query: 144 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 323
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 14 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 73
Query: 324 INYGKMKHHRNYKYH 368
+Y +KH R KYH
Sbjct: 74 FSYKHLKHERLRKYH 88
>AF088918-1|AAC34895.1| 94|Homo sapiens F1F0-type ATPase subunit f
protein.
Length = 94
Score = 59.3 bits (137), Expect = 7e-09
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +3
Query: 144 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 323
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 20 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 324 INYGKMKHHRNYKYH 368
+Y +KH R KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>AK223348-1|BAD97068.1| 94|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit f
isoform 2a v protein.
Length = 94
Score = 58.8 bits (136), Expect = 1e-08
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +3
Query: 144 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 323
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 20 EVKLGELPSWVLMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 324 INYGKMKHHRNYKYH 368
+Y +KH R KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>BC003678-1|AAH03678.1| 94|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F2
protein.
Length = 94
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +3
Query: 144 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 323
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 20 EVKLLELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 324 INYGKMKHHRNYKYH 368
+Y +KH R KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>AL834261-1|CAD38936.1| 377|Homo sapiens hypothetical protein
protein.
Length = 377
Score = 29.9 bits (64), Expect = 5.1
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 48 MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFGQVKLNEI-GGWLGRRSKTPSAVMGACSR 224
+A YP Y+P+ P P + P PF V G LG P+A +G
Sbjct: 220 LAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLG--PTYPAAQLGPRGA 277
Query: 225 AWWRWQHKYVQPKKVG 272
A + W + P + G
Sbjct: 278 AGYSWSPQRSMPPRPG 293
>BC142702-1|AAI42703.1| 355|Homo sapiens vacuolar protein sorting
37 homolog C (S. cerevisiae) protein.
Length = 355
Score = 29.1 bits (62), Expect = 9.0
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +3
Query: 51 AFGDYPKEYNPAVHGPYDPARYYGKPDTPFGQVKLNEI-GGWLGRRSKTPSAVMGACSRA 227
A YP Y+P+ P P + P PF V G LG P+A +G A
Sbjct: 199 AMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLG--PTYPAAQLGPRGAA 256
Query: 228 WWRWQHKYVQPKKVG 272
+ W + P + G
Sbjct: 257 GYSWSPQRSMPPRPG 271
>BC141827-1|AAI41828.1| 355|Homo sapiens vacuolar protein sorting
37 homolog C (S. cerevisiae) protein.
Length = 355
Score = 29.1 bits (62), Expect = 9.0
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +3
Query: 51 AFGDYPKEYNPAVHGPYDPARYYGKPDTPFGQVKLNEI-GGWLGRRSKTPSAVMGACSRA 227
A YP Y+P+ P P + P PF V G LG P+A +G A
Sbjct: 199 AMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLG--PTYPAAQLGPRGAA 256
Query: 228 WWRWQHKYVQPKKVG 272
+ W + P + G
Sbjct: 257 GYSWSPQRSMPPRPG 271
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,961,817
Number of Sequences: 237096
Number of extensions: 1739923
Number of successful extensions: 4194
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4194
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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