Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_D07
         (498 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   1.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   1.3  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   9.4  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +3

Query: 111 RYYGKPDTPFGQV--KLNEIGGWLGRRSKTPSAVMGA 215
           R+Y  P TPFG V  K+N     L    +TP  ++ +
Sbjct: 290 RFYYNPFTPFGPVTEKVNNDSNSLPFIDRTPIEIINS 326


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 192 SYSCDPTIRRFHSVLPVQRVYQAC 121
           SY CD  +  F   L  + +Y AC
Sbjct: 129 SYDCDVDVSTFFDQLGQEVIYTAC 152


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +3

Query: 111 RYYGKPDTPFGQV--KLNEIGGWLGRRSKTPSAVMGA 215
           R+Y  P TPFG V  K+N     L    +TP  ++ +
Sbjct: 290 RFYYNPFTPFGPVTEKVNNDSNSLPFIDRTPIEIINS 326


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 129 QACHNNGLDHTARGQQGCILSGN 61
           Q CHN G+ H     +  ++S N
Sbjct: 169 QFCHNAGIVHADVKPKNILMSKN 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,217
Number of Sequences: 438
Number of extensions: 3137
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)