Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D04
(445 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 208 3e-55
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 29 0.24
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 29 0.32
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 28 0.74
SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual 27 0.98
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 0.98
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 27 0.98
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 26 2.3
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 26 2.3
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 26 3.0
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 25 4.0
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 25 4.0
SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces po... 25 4.0
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 25 4.0
SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr 1|||M... 25 4.0
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 25 6.9
SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1 ... 25 6.9
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 24 9.1
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 9.1
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 24 9.1
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 24 9.1
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 24 9.1
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 24 9.1
SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit Cdc22|... 24 9.1
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 24 9.1
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 208 bits (508), Expect = 3e-55
Identities = 91/118 (77%), Positives = 103/118 (87%)
Frame = +3
Query: 90 TDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGIC 269
++ LTRIAIV+ D+C+PK+CRQEC++SCPVVR GKLCIEV P D+IA ISE LCIGCGIC
Sbjct: 2 SESLTRIAIVSEDKCRPKKCRQECRRSCPVVRTGKLCIEVNPTDRIAFISETLCIGCGIC 61
Query: 270 VKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTA 443
VKKCPF AI IIN+P+NLE THRYS NSFKLHRLP PRPG+VLGLVG NGIGKSTA
Sbjct: 62 VKKCPFGAINIINLPTNLESEVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTA 119
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 29.5 bits (63), Expect = 0.24
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 330 HTTHRYSKN-SFKLHRLPIP-RPGEVLGLVGQNGIGKST 440
H + +Y ++ SF L+ + I P E +G+VG+ G GKST
Sbjct: 1230 HYSAKYREDLSFALNNINIEISPREKIGIVGRTGAGKST 1268
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 29.1 bits (62), Expect = 0.32
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 381 IPRPGEVLGLVGQNGIGKST 440
+ +PG+V+ LVG++G GKST
Sbjct: 606 VAQPGKVIALVGESGGGKST 625
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 0.74
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 237 SEELCIGCGICVKKCPFDAITI 302
+EEL +G G C+ PFD +T+
Sbjct: 239 NEELLMGYGFCLPDNPFDTVTL 260
>SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 27.5 bits (58), Expect = 0.98
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -3
Query: 200 AQFAHTHNWATLLAFLSTSFWF 135
A+ +HT+NWA L++ ++ FWF
Sbjct: 19 AESSHTNNWAVLIS--TSRFWF 38
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 27.5 bits (58), Expect = 0.98
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 330 HTTHRYSKN-SFKLHRLPIP-RPGEVLGLVGQNGIGKST 440
H + RY +N L+ + + +P E +G+VG+ G GKST
Sbjct: 1228 HYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKST 1266
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 27.5 bits (58), Expect = 0.98
Identities = 9/26 (34%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -3
Query: 131 TIRIYYS-DTGKFICFLIISFSGHHC 57
T+++YY+ D+G ++C ++ F+G C
Sbjct: 589 TVKLYYAFDSGDYLCLVMDYFNGGDC 614
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 26.2 bits (55), Expect = 2.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 15 ANVGKVSPTFALLSAVMSRKRDNEETDKLTRIAI 116
AN K+ + L A+ S + D+E DKL +++I
Sbjct: 105 ANSSKIYESMIALKALNSSQNDSEVKDKLEKLSI 138
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 26.2 bits (55), Expect = 2.3
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 393 GEVLGLVGQNGIGKST 440
G GL G+NGIGKST
Sbjct: 208 GRRYGLTGRNGIGKST 223
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 25.8 bits (54), Expect = 3.0
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 351 KNSFKLHRLPIPRP-GEVLGLVGQNGIGKSTA 443
KN++ + P P G+ LG++G GIGK+ A
Sbjct: 141 KNNWNANCKPSHDPEGKTLGILGLGGIGKTMA 172
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 4.0
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 301 SSIFHQIWRNTPLIVIPRIL--SNFTGYQFHVLE-KCLG*LVKTVLASP 438
SSIF +W ++ L ++P+ L + F ++ C+G V+T +P
Sbjct: 323 SSIFFWVWCHSLLYIVPKTLPIKPLSSLLFVLISFTCIGLYVRTAFQNP 371
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 25.4 bits (53), Expect = 4.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 387 RPGEVLGLVGQNGIGKST 440
+PG+ + VG +G GKST
Sbjct: 1145 KPGQFVAFVGSSGCGKST 1162
>SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 427
Score = 25.4 bits (53), Expect = 4.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 255 QYTVLQRWSLFYHWVLLRCTVCPYAQLGNSSCIPVDI 145
+Y +L++ S+ Y + + T G SSCIPV+I
Sbjct: 49 RYELLRKSSIRYTILQIGITFIYLQNNGKSSCIPVNI 85
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 25.4 bits (53), Expect = 4.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 270 VKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTA 443
+ K D TI IP+N H H++ +S ++ ++ + R V G +G S A
Sbjct: 269 IAKAKIDT-TIAVIPANAFHHLVHKFPNSSAQIVQVILTRFQRVTFSTGYEYLGLSDA 325
>SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 25.4 bits (53), Expect = 4.0
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 333 TTHRYSKNS-FKLHRLPIPRPGEVL--GLVGQNGIGKST 440
T YSK + R + RPG L G+VG IGKST
Sbjct: 22 TRRYYSKQKDISIVRQRLGRPGNHLKIGIVGMPNIGKST 60
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 24.6 bits (51), Expect = 6.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 393 GEVLGLVGQNGIGKST 440
G+ GL+G NG GKST
Sbjct: 101 GQRYGLLGDNGSGKST 116
>SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 581
Score = 24.6 bits (51), Expect = 6.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 234 WSLFYHWVL-LRCTVCPYAQLGNSSCIPVDIFL 139
W F W+ + CT+ Y + +S+ I V IFL
Sbjct: 402 WRPFSFWLFSIFCTIAAYYLVSSSTKITVFIFL 434
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 24.2 bits (50), Expect = 9.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 66 SRKRDNEETDKLTRIAIVNADRCKPKRCRQECKK 167
SR+ ETD+ R + + +R +CRQ K+
Sbjct: 462 SRRNSKNETDEEKRKSFLERNRQAALKCRQRKKQ 495
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 15 ANVGKVSPTFALLSAVMSRKR 77
+NVG +S T AL+SAV KR
Sbjct: 545 SNVGVLSNTAALISAVSKGKR 565
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 24.2 bits (50), Expect = 9.1
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +3
Query: 390 PGEVLGLVGQNGIGKST 440
PG++ L+G++G GK+T
Sbjct: 910 PGKLTALMGESGAGKTT 926
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 24.2 bits (50), Expect = 9.1
Identities = 13/73 (17%), Positives = 28/73 (38%)
Frame = +3
Query: 162 KKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKCPFDAITIINIPSNLEKHTTH 341
K P++ + C+ + ++ + C G + P + I ++ LEK+
Sbjct: 305 KNEQPILLSSRKCVLTDEEEPPCLMTADCCAGVAFLSRGAPKNCICRVSFKEFLEKNDNV 364
Query: 342 RYSKNSFKLHRLP 380
+S L+ P
Sbjct: 365 GVQTSSIPLNGKP 377
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 351 KNSFKLHRLPIPRP-GEVLGLVGQNGIGKST 440
+N F L + + P GE++ ++G +G GKST
Sbjct: 447 ENLFSLINVSVFIPFGELVHIIGPSGSGKST 477
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 24.2 bits (50), Expect = 9.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 393 GEVLGLVGQNGIGKST 440
G G+VG NG GKST
Sbjct: 470 GHRYGVVGHNGCGKST 485
>SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit
Cdc22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 24.2 bits (50), Expect = 9.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 129 RCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGI 266
R + + +E KK PV++ GK I P + I E + C I
Sbjct: 757 RARNEESNEENKK--PVIKNGKAEISAEPTKEEIDIYNEKVLACSI 800
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 24.2 bits (50), Expect = 9.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 243 LQRWSLFYHWVLLRCTVCPYAQLGNS 166
+ W + YH +CTVC A L +
Sbjct: 507 MANWVMDYHQASDKCTVCTPASLSKN 532
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,030,438
Number of Sequences: 5004
Number of extensions: 44873
Number of successful extensions: 159
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 162176800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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