Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D02
(395 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.028
SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.19
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 31 0.26
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.34
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.34
SB_11869| Best HMM Match : Excalibur (HMM E-Value=8) 29 1.0
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 1.4
SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4) 29 1.4
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 29 1.4
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 29 1.4
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 1.4
SB_25108| Best HMM Match : Cornifin (HMM E-Value=0.00015) 29 1.8
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 28 2.4
SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34) 28 2.4
SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37) 28 2.4
SB_48772| Best HMM Match : rve (HMM E-Value=4.2e-35) 28 2.4
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 28 2.4
SB_39098| Best HMM Match : EGF (HMM E-Value=5.2e-07) 28 2.4
SB_36737| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 2.4
SB_28729| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 2.4
SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_14178| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 2.4
SB_13901| Best HMM Match : rve (HMM E-Value=5.5e-29) 28 2.4
SB_13442| Best HMM Match : rve (HMM E-Value=2.3e-13) 28 2.4
SB_42915| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 2.4
SB_39602| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 2.4
SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_30319| Best HMM Match : rve (HMM E-Value=1.2e-37) 28 2.4
SB_19168| Best HMM Match : rve (HMM E-Value=3.9e-38) 28 2.4
SB_17252| Best HMM Match : Integrase_Zn (HMM E-Value=0.96) 28 2.4
SB_14976| Best HMM Match : rve (HMM E-Value=1.3e-38) 28 2.4
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_10281| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 2.4
SB_3392| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 2.4
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 28 3.2
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24) 28 3.2
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 28 3.2
SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_40554| Best HMM Match : Integrase_Zn (HMM E-Value=0.79) 27 4.2
SB_16656| Best HMM Match : Methyltransf_3 (HMM E-Value=1.2e-19) 27 4.2
SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3) 27 4.2
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 27 4.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 27 4.2
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 27 5.5
SB_50721| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_26361| Best HMM Match : fn3 (HMM E-Value=0) 27 5.5
SB_42599| Best HMM Match : DUF536 (HMM E-Value=7.2) 27 5.5
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 27 5.5
SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_48649| Best HMM Match : DUF809 (HMM E-Value=1.3) 27 7.3
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 27 7.3
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_16047| Best HMM Match : rve (HMM E-Value=2e-12) 27 7.3
SB_111| Best HMM Match : Drf_FH1 (HMM E-Value=0.31) 27 7.3
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 27 7.3
SB_40705| Best HMM Match : Hormone_5 (HMM E-Value=5.7) 27 7.3
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 27 7.3
SB_50003| Best HMM Match : PAN (HMM E-Value=0.044) 26 9.6
SB_38251| Best HMM Match : fn3 (HMM E-Value=2.1e-05) 26 9.6
SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23) 26 9.6
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 26 9.6
SB_15280| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.6
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 34.7 bits (76), Expect = 0.028
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 286
MAD + +A P E T T E+ K+P+ EV E G+E +
Sbjct: 35 MADEEGKATEATPPEATETPAAEAAPAKAPSADAEVQEEAGEETASATQADEATTEAQPQ 94
Query: 287 DAEESNDAT 313
+ N AT
Sbjct: 95 EGAAENPAT 103
>SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 32.7 bits (71), Expect = 0.11
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = +2
Query: 116 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAE 295
A + ++ P +VT EV SP +KS T+ P+S K DAE
Sbjct: 456 AKKKAKEQCPNDVT--EVSVSPAEKSDTEPITKPKSTSK-----------MTKDQTKDAE 502
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEEEATEK 394
+ DA DV E K K K T+ ++E+ ++
Sbjct: 503 KQYDAKAKNDVVEKKPKAHKAKKTLDKKESKKE 535
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.9 bits (69), Expect = 0.19
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +2
Query: 128 KQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESND 307
K APE S E E+P + T PE+ + T + +
Sbjct: 4444 KTTMAPETTVSPETTEAPGTTVAPETTMAPETTIPQETTIAPESTEAPETTMAPETTATE 4503
Query: 308 ATENGDVTEVKETGVKRKSTVVEE 379
+TE + T V ET V ++T+ E
Sbjct: 4504 STETPETTIVPETTVAPETTMAPE 4527
Score = 27.5 bits (58), Expect = 4.2
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGK-ENGTXXXXXXXXXXXXNGDAE 295
A + APE + E+ +P+ S ++ T PE+ E +A
Sbjct: 1029 AAPETTLAPETTVAREITTAPVTTSVSETTAPPETTASPETTVEPETTVAPETTVTPEAT 1088
Query: 296 ESNDATENGDVTEVKETGVKRKST 367
+ D T + TE +T ++T
Sbjct: 1089 AAPDTTVAPETTEAPQTTAAPETT 1112
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 1/81 (1%)
Frame = +2
Query: 140 APEEVTSTEVKESPIKKSPTKKTEVPES-NGKENGTXXXXXXXXXXXXNGDAEESNDATE 316
APE S E E+P + T PES E + +++ T
Sbjct: 3968 APETTVSPETTEAPGTTVAPETTMAPESTEAPETTMAPETTVAAETTMAPETTLASETTT 4027
Query: 317 NGDVTEVKETGVKRKSTVVEE 379
D T ET + ++TV E
Sbjct: 4028 TPDTTVAPETTMAPETTVAPE 4048
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 31.5 bits (68), Expect = 0.26
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 304
E+Q EE T E +++ ++ +K E E +G+E + +++ESN
Sbjct: 89 EEQTEEEEEQTEEEEEQTEEEEEEEEKEEGKEEDGEEEVVTDERGISSSKDESNESDESN 148
Query: 305 DATENGDVTE 334
++ E+ + E
Sbjct: 149 ESDESNESDE 158
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 31.1 bits (67), Expect = 0.34
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Frame = +2
Query: 110 ADAAVEKQDAAPE--EVTSTEVKESPIKKSPTKK-TEVPESNGK----ENGTXXXXXXXX 268
A+ + D A E E TE +ES +K S +KK T + S G+ ++GT
Sbjct: 60 AEKLTDPPDKAGESSEEERTESQESNVKSSDSKKDTNIASSKGEAPEDKSGTMSGIMDSL 119
Query: 269 XXXXNGDAEESNDATENG---DVTEVKETGVKR--KSTVVEEEATE 391
E +D +NG DVT K+ + KS++ E++ E
Sbjct: 120 SNLFKVPVGEEDDGDDNGAEEDVTNEKQINQENVDKSSISEDKKEE 165
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 31.1 bits (67), Expect = 0.34
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 122 VEKQDAAPEEVTSTEVKESPIKKSP-TKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 298
++K D+ + + KE+ +K+ K ++ + + E+G +G++ E
Sbjct: 860 LDKTDSGKVAMFAQPAKETANEKAGMVKNSKASKEDSNESGESGESGKSGESGESGESGE 919
Query: 299 SNDATENGDVTEVKETGVKRKSTVVEE 379
S ++ E+G+ E E+G S EE
Sbjct: 920 SGESGESGESGESGESGESGDSAAGEE 946
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 137 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGK-ENGTXXXXXXXXXXXXNGDAEESNDAT 313
A P + T+ E K +K S K + ES E+G +G++ ES ++
Sbjct: 872 AQPAKETANE-KAGMVKNSKASKEDSNESGESGESGKSGESGESGESGESGESGESGESG 930
Query: 314 ENGDVTEVKETGVKRKS 364
E+G+ E ++ +S
Sbjct: 931 ESGESGESGDSAAGEES 947
Score = 26.2 bits (55), Expect = 9.6
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +2
Query: 116 AAVEKQDAAPEEVTSTEVKES--PIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGD 289
A+ E + V+S+ K S P+ K+ + K + KE D
Sbjct: 836 ASGESGSGSGSSVSSSITKRSLGPLDKTDSGKVAMFAQPAKETANEKAGMVKNSKASKED 895
Query: 290 AEESNDATENGDVTEVKETGVKRKS 364
+ ES ++ E+G E E+G +S
Sbjct: 896 SNESGESGESGKSGESGESGESGES 920
>SB_11869| Best HMM Match : Excalibur (HMM E-Value=8)
Length = 269
Score = 29.5 bits (63), Expect = 1.0
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +2
Query: 113 DAAVEKQDAAPEEVTS--TEVKESPIKKSPTKKTEVPESNGK-ENGTXXXXXXXXXXXXN 283
+AA ++ AA E TS TE ++ + + T K+ S K E+
Sbjct: 156 EAAASEEVAAATEGTSAATETNDASAEVNETDKSAEDASEAKPEDDAAEGAAIPSEETGA 215
Query: 284 GDAEESNDATENGDVTEVKETGVKRKSTVVEEEATEK 394
+ + + ATE GD E K ++T + +EK
Sbjct: 216 AENKPESSATEGGDKPEATAEVTKEETTKEGNDESEK 252
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.1 bits (62), Expect = 1.4
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXX----XXXXXXNG 286
A + APE S E +P PT+ T PE+ T
Sbjct: 272 AATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPEITFAPETTVVPETTPALETT 331
Query: 287 DAEESNDATENGDVTEVKETGVKRKSTVVEE 379
A ES ATE+ T ET V +++TV E
Sbjct: 332 SAPESTAATES---TVAPETTVSQETTVAPE 359
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +2
Query: 137 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXX-XXXXXXXXXXNGDAEESNDAT 313
+APE +TE +P PT+ T PE+ G + T ++ + T
Sbjct: 380 SAPESTAATESTVAPETTVPTEITAAPETTGAPDTTLAPETTVALESTMTPESTVPPETT 439
Query: 314 ENGDVTEVKETGVKRKSTVVEE 379
+ T ET +ST+ E
Sbjct: 440 VATETTVAPETTAAPESTLAPE 461
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN-GKENGTXXXXXXXXXXXXNGDAE 295
A + APE S E +P PT+ T VPE+ E + +
Sbjct: 338 AATESTVAPETTVSQETTVAPETTVPTETTVVPETTPALETTSAPESTAATESTVAPETT 397
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEE 379
+ T + T +T + ++TV E
Sbjct: 398 VPTEITAAPETTGAPDTTLAPETTVALE 425
>SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4)
Length = 1633
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 152 VTSTEVKESPIKKSPTKK 205
VT T VKESP+K SPT K
Sbjct: 849 VTDTPVKESPVKFSPTGK 866
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/73 (20%), Positives = 34/73 (46%)
Frame = +2
Query: 146 EEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGD 325
EE T E +++ ++ +K E E +G+E + +++ESN++ E+ +
Sbjct: 41 EEQTEEEEEQTEEEEEEEEKEEGKEEDGEEEVVTDERGISSSKDESDESDESNESDESNE 100
Query: 326 VTEVKETGVKRKS 364
+ E+ +S
Sbjct: 101 SDKSNESDESNES 113
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 228 PLLSGTSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
P+ +FL DFL SL S +TSS + S F + +S++
Sbjct: 304 PISEQQGIFLPSDFLTSSSLPSDFLTSSSSLSDFLSLSSSL 344
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -3
Query: 201 LVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
L+ DFL S SV +TSS + S F T++S++
Sbjct: 553 LLSDFLTSSSSLSVFLTSSSSLSVFLTSSSSL 584
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -3
Query: 201 LVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
L+ DFL S SV +TSS + S F T++S++
Sbjct: 798 LLSDFLTSSSSLSVFLTSSSSLSVFLTSSSSL 829
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAAS 112
TS L DFL SL S +TSS + S F T++S
Sbjct: 599 TSSSLPSDFLTSSSLPSDFLTSSSSLSVFPTSSS 632
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAAS 112
TS L DFL SL S +TSS + S F T++S
Sbjct: 864 TSSSLPSDFLTSSSLPSDFLTSSSSLSVFPTSSS 897
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAAS 112
TS L DFL SL S +TSS + S F T++S
Sbjct: 1194 TSSSLPSDFLTSSSLPSDFLTSSSSLSVFPTSSS 1227
Score = 27.5 bits (58), Expect = 4.2
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 225 LLSGTSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
L S +S L+ DFL S S +TSS + S F T++S++
Sbjct: 990 LTSSSSRGLLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSL 1029
Score = 27.5 bits (58), Expect = 4.2
Identities = 24/95 (25%), Positives = 33/95 (34%), Gaps = 3/95 (3%)
Frame = -3
Query: 387 VASSSTTVDFLFTPVSLTSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPLLSG-- 214
+ SSS+ DFL + SL+ L
Sbjct: 1103 LTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTWSSSLSVFLTSSSLPSDF 1162
Query: 213 -TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAAS 112
TS + DFL SL S +TSS + S F T++S
Sbjct: 1163 LTSSSSLSDFLTSSSLLSDFLTSSSSLSVFPTSSS 1197
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
TS L DFL SL S +TSS + S F T +S +
Sbjct: 519 TSSSLPSDFLTSSSLPSDFLTSSSSLSDFLTLSSLL 554
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAIII 100
TS + DFL SL S +TSS + S F T++S++ +
Sbjct: 539 TSSSSLSDFLTLSSLLSDFLTSSSSLSVFLTSSSSLSV 576
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
TS L DFL S SV TSS S F T++S++
Sbjct: 609 TSSSLPSDFLTSSSSLSVFPTSSSLPSDFLTSSSSL 644
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 222 LSGTSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
LS L DFL SL S +TSS + S F T++S++
Sbjct: 711 LSDFLTSLPSDFLTSSSLPSDFLTSSSSLSDFLTSSSSL 749
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
TS L DFL SL S +TSS + S F T +S +
Sbjct: 764 TSSSLPSDFLTSSSLPSDFLTSSSSLSDFLTLSSLL 799
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAIII 100
TS + DFL SL S +TSS + S F T++S++ +
Sbjct: 784 TSSSSLSDFLTLSSLLSDFLTSSSSLSVFLTSSSSLSV 821
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
TS L DFL S SV TSS S F T++S++
Sbjct: 874 TSSSLPSDFLTSSSSLSVFPTSSSLPSDFLTSSSSL 909
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAAS 112
TS L+ DFL S SV TSS S F T++S
Sbjct: 1174 TSSSLLSDFLTSSSSLSVFPTSSSLPSDFLTSSS 1207
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
TS L DFL S SV TSS S F T++S++
Sbjct: 1204 TSSSLPSDFLTSSSSLSVFPTSSSLPSDFLTSSSSL 1239
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 201 LVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
L DFL SL S +TSS + S F T++S++
Sbjct: 473 LPSDFLTSSSLPSDFLTSSSSLSDFLTSSSSL 504
Score = 26.2 bits (55), Expect = 9.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAIII 100
TS L DFL S S +TSS + S F T++S++ +
Sbjct: 479 TSSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSV 516
Score = 26.2 bits (55), Expect = 9.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 213 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAIII 100
TS L DFL S S +TSS + S F T++S++ +
Sbjct: 724 TSSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSV 761
Score = 26.2 bits (55), Expect = 9.6
Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Frame = -3
Query: 387 VASSSTTVDFLFTPVSLTS-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPLLSG- 214
+ SSS+ DFL + SL+ + LS
Sbjct: 1073 LTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDF 1132
Query: 213 -TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 106
TS + DFL S SV +TSS S F T++S++
Sbjct: 1133 LTSSSSLSDFLTWSSSLSVFLTSSSLPSDFLTSSSSL 1169
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +2
Query: 137 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXX-XXXXXXXXXXNGDAEESNDAT 313
+APE +TE +P PT+ T PE+ G + T ++ + T
Sbjct: 2076 SAPESTAATESTVAPETTVPTEITAAPETTGAPDTTLAPETTVALESTMTPESTVPPETT 2135
Query: 314 ENGDVTEVKETGVKRKSTVVEE 379
+ T ET +ST+ E
Sbjct: 2136 VATETTVAPETTAAPESTLAPE 2157
Score = 27.5 bits (58), Expect = 4.2
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGK-ENGTXXXXXXXXXXXXNGDAE 295
A + APE + E+ +P+ S ++ T PE+ E +A
Sbjct: 2544 AAPETTLAPETTVAREITTAPVTTSVSETTAPPETTASPETTVEPETTVAPETTVTPEAT 2603
Query: 296 ESNDATENGDVTEVKETGVKRKST 367
+ D T + TE +T ++T
Sbjct: 2604 AAPDTTVAPETTEAPQTTAAPETT 2627
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN-GKENGTXXXXXXXXXXXXNGDAE 295
A + APE S E +P PT+ T VPE+ E + +
Sbjct: 2034 AATESTVAPETTVSQETTVAPETTVPTETTVVPETTPALETTSAPESTAATESTVAPETT 2093
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEE 379
+ T + T +T + ++TV E
Sbjct: 2094 VPTEITAAPETTGAPDTTLAPETTVALE 2121
>SB_25108| Best HMM Match : Cornifin (HMM E-Value=0.00015)
Length = 858
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/60 (25%), Positives = 23/60 (38%)
Frame = +2
Query: 215 PESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDVTEVKETGVKRKSTVVEEEATEK 394
PE NGK+N +N + V+ K+ K TV++E A E+
Sbjct: 213 PEENGKDNNFNSYKNGSITSKATASRNNTNGHLKKRSVSRHKDHRRSDKRTVIDETAEER 272
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 2236 PEPVRSTELPEKPWEDLATDLTEIPGGN 2263
>SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34)
Length = 863
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 532 PEPVRSTELPEEPWEDLATDLTEIPGGN 559
>SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 488 PEPVRSTELPEEPWEDLATDLTEIPGGN 515
>SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37)
Length = 971
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 699 PEPVRSTELPEEPWEDLATDLTEIPGGN 726
>SB_48772| Best HMM Match : rve (HMM E-Value=4.2e-35)
Length = 494
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 251 PEPVRSTELPEEPWEDLATDLTEIPGGN 278
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 1059 PEPVRSTELPEEPWEDLATDLTEIPGGN 1086
>SB_39098| Best HMM Match : EGF (HMM E-Value=5.2e-07)
Length = 577
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 536 PEPVRSTELPEEPWEDLATDLTEIPGGN 563
>SB_36737| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 358
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 24 PEPVRSTELPEEPWEDLATDLTEIPGGN 51
>SB_28729| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 374
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 40 PEPVRSTELPEEPWEDLATDLTEIPGGN 67
>SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1551
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 1249 PEPVRSTELPEKPWEDLATDLTEIPGGN 1276
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 28.3 bits (60), Expect = 2.4
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXN-GDAE 295
A+ K AAPE + TE P + K T PE+ K + T +
Sbjct: 2392 ALPKTTAAPETTSPTETTAVPGTTAAPKTTASPETTAKPDTTGAAETTAVPVTTSVPGTT 2451
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEEEAT 388
+ + T D T V T ++T V +T
Sbjct: 2452 VAAETTVVRDTTAVPGTTAALEATAVTGTST 2482
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 244
AV + AAPE ++ E +P S + T VPE+ T
Sbjct: 1900 AVPEATAAPETTSAPETTAAPETTSAPETTSVPETTSAPETT 1941
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE-SNGKENGTXXXXXXXXXXXXNGDAE 295
AV A PE + + E+ +P + + E PE ++ E + +
Sbjct: 2290 AVPGTTAVPETIAAPEITAAPENTAVPETIETPETTSAPETTSAPETTALPKTTAVPETT 2349
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEE 379
+ T + T ET K+T V+E
Sbjct: 2350 TPPETTAKPETTGAPETTSAPKTTAVQE 2377
Score = 26.6 bits (56), Expect = 7.3
Identities = 22/90 (24%), Positives = 33/90 (36%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 298
A+ + AAPE + E P + K T +PE+ T +
Sbjct: 2152 ALPETTAAPETIAKPETTAPPETTALPKTTTLPETTAAPETTAKPETTGA-----PETTS 2206
Query: 299 SNDATENGDVTEVKETGVKRKSTVVEEEAT 388
++D T T V E+ +TVV E T
Sbjct: 2207 ASDTTAVRGTTAVPESTAVPGTTVVPETTT 2236
Score = 26.2 bits (55), Expect = 9.6
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 1/90 (1%)
Frame = +2
Query: 113 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDA 292
+ AV + PE ++ E +P + K T VPE+ T +
Sbjct: 2312 NTAVPETIETPETTSAPETTSAPETTALPKTTAVPETTTPPETTAKPETTGAPETTSAPK 2371
Query: 293 EES-NDATENGDVTEVKETGVKRKSTVVEE 379
+ +AT + + T ET K+T E
Sbjct: 2372 TTAVQEATASPETTSEPETTALPKTTAAPE 2401
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 801 PEPVRSTELPEEPWEDLATDLTEIPGGN 828
>SB_14178| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 283
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 40 PEPVRSTELPEEPWEDLATDLTEIPGGN 67
>SB_13901| Best HMM Match : rve (HMM E-Value=5.5e-29)
Length = 202
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 40 PEPVRSTELPEEPWEDLATDLTEIPGGN 67
>SB_13442| Best HMM Match : rve (HMM E-Value=2.3e-13)
Length = 271
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 154 PEPVRSTELPEEPWEDLATDLTEIPGGN 181
>SB_42915| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 610
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 276 PEPVRSTELPEEPWEDLATDLTEIPGGN 303
>SB_39602| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 523
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 292 PEPVRSTELPEEPWEDLATDLTEIPGGN 319
>SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 433 PEPVRSTELPEEPWEDLATDLTEIPGGN 460
>SB_30319| Best HMM Match : rve (HMM E-Value=1.2e-37)
Length = 255
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 40 PEPVRSTELPEEPWEDLATDLTEIPGGN 67
>SB_19168| Best HMM Match : rve (HMM E-Value=3.9e-38)
Length = 586
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 116 PEPVRSTELPEEPWEDLATDLTEIPGGN 143
>SB_17252| Best HMM Match : Integrase_Zn (HMM E-Value=0.96)
Length = 391
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 350 PEPVRSTELPEEPWEDLATDLTEIPGGN 377
>SB_14976| Best HMM Match : rve (HMM E-Value=1.3e-38)
Length = 1172
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 929 PEPVRSTELPEEPWEDLATDLTEIPGGN 956
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 565 PEPVRSTELPEEPWEDLATDLTEIPGGN 592
>SB_10281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 166 PEPVRSTELPEEPWEDLATDLTEIPGGN 193
>SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 899
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 565 PEPVRSTELPEEPWEDLATDLTEIPGGN 592
>SB_3392| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 374
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 40 PEPVRSTELPEEPWEDLATDLTEIPGGN 67
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 27.9 bits (59), Expect = 3.2
Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVK-ESPIKKSPTKKTEVPESNGK--ENGTXXXXXXXXXXXXNGDAE 295
++++ E T E + E +K KKTE E GK E G + E
Sbjct: 51 KQEETEKEAETEKEAETEKEAEKEKKKKTEKEEEKGKQEETGKEAETEKQAETEKQEETE 110
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEEEATEK 394
+ + G+ + ET + ++ + A EK
Sbjct: 111 KEGGTEKEGETEKEGETEKEAENIIFLPIANEK 143
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 244
A+ K AAPE + TE P + K T PE+ K + T
Sbjct: 2935 ALPKTTAAPETTSPTETTAVPGTTAAPKTTASPETTAKPDTT 2976
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 244
AV + AAPE ++ E +P S + T VPE+ T
Sbjct: 3055 AVPEATAAPETTSAPETTAAPETTSAPETTSVPETTSAPETT 3096
>SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24)
Length = 1329
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 185 KKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAE 295
K SP KKT+ E+N + T NGD++
Sbjct: 162 KSSPVKKTKTEETNNETEVTQESTNASVNSNDNGDSQ 198
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 128 KQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENG 241
KQ+++ E+ +S E +E P KK+ K + P +G
Sbjct: 239 KQESSSEDDSSNEEEEKPKKKADVKGKKTPAKQESSSG 276
Score = 26.2 bits (55), Expect = 9.6
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +2
Query: 128 KQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESND 307
KQ+++ E+ +S E E P KK+ K GK+ T + D EE
Sbjct: 176 KQESSSEDDSSDEEDEKPKKKADNK--------GKK--TQAKQESSSEEDDSSDEEEEKP 225
Query: 308 ATENGDVTEVKETGVKRKSTVVEEEATEK 394
+ D +VK+T K++S+ ++ + E+
Sbjct: 226 KKKADD--KVKKTPAKQESSSEDDSSNEE 252
>SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +2
Query: 149 EVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDV 328
E+ S EVK+ KK+ +K+ +++G + T GD E N A +
Sbjct: 121 EIASKEVKKDKKKKNYSKEKGSSDNSGSGDKTTKPEKNDAKKKDKGDKPEKNYAKKKDKG 180
Query: 329 TEVKETGVKRKS 364
+ ++ K+K+
Sbjct: 181 DKPEKNYAKKKN 192
>SB_40554| Best HMM Match : Integrase_Zn (HMM E-Value=0.79)
Length = 207
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T TE+P N
Sbjct: 166 PEPVRSTELPEEPWEDLATDLTELPGGN 193
>SB_16656| Best HMM Match : Methyltransf_3 (HMM E-Value=1.2e-19)
Length = 613
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 281 NGDAEESNDATENGDVTEVKETGVKRKSTVVEEEATEK 394
NGDA + DA NG ++ KRK + +E EK
Sbjct: 334 NGDAVPNGDAVPNGCENGIENENKKRKINLSYQEWIEK 371
>SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3)
Length = 376
Score = 27.5 bits (58), Expect = 4.2
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 137 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 235
A PEE + EV ES P K TEVPE E
Sbjct: 150 AGPEETPTKEVLESA---EPVKGTEVPEEGDVE 179
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 27.5 bits (58), Expect = 4.2
Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE-SNGKENGTXXXXXXXXXXXXNGDAE 295
A + AAPE + E +P S ++ T PE + E
Sbjct: 689 AAPETTAAPETTAAPETTAAPETTSASETTAAPETTTAPETTAASETTAVLETTAAPKTT 748
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEE 379
+ + T + T ET V ++T E
Sbjct: 749 AAPETTAEPETTAASETTVASETTAAPE 776
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 244
AV + AAPE ++ E +P + ++ T PE+ K T
Sbjct: 953 AVPETTAAPETTSTPETTSTPGTLAASETTAAPETTAKPETT 994
Score = 26.2 bits (55), Expect = 9.6
Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNG-KENGTXXXXXXXXXXXXNGDAE 295
A + AAPE + E E+P + + T PE+ E +
Sbjct: 821 AAPETTAAPETTAAPETTETPETTAVPETTAAPETTAVPETTAAPETTAAPETTAAPETT 880
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEE 379
+ + T D T ET ++T E
Sbjct: 881 AAPETTAAPDTTAAPETTAALETTAAPE 908
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 27.5 bits (58), Expect = 4.2
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 137 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 235
A PEE + EV ES P K TEVPE E
Sbjct: 2362 AGPEETPTKEVLESA---EPVKGTEVPEEGDVE 2391
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.5 bits (58), Expect = 4.2
Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 1/88 (1%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDA-E 295
A + AAPE E +P P ++T PE+ T + A
Sbjct: 679 AAPETTAAPETTLLPETTSAPATTMPPEQTAAPETTVAPETTDAPATTLASETTDAPAIT 738
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEE 379
+ + T + T ET ++T V E
Sbjct: 739 MAAETTAAPETTVAPETTAAPETTAVPE 766
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 302 NDATENGDVTEVKETGVKRKSTVVEEEATEK 394
+D +EN D T+ ETG K + + E +K
Sbjct: 738 SDQSENNDATDGSETGDKNQEVIAEFHRIQK 768
>SB_50721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1057
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 146 EEVTSTEVKESPIKKSPTKKTEVPESNGKEN 238
EE S +KES K P EVPESN E+
Sbjct: 946 EEKFSVSLKESKRSK-PISSAEVPESNSDED 975
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 281 NGDAEESNDATENGDVTEVKETGVKRKSTVVEEE 382
NG+ EE +A + D + +E G + + V++EE
Sbjct: 221 NGEEEEEEEAEDVNDDEQQQEDGEEEATEVIDEE 254
>SB_26361| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1898
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/57 (24%), Positives = 22/57 (38%)
Frame = +2
Query: 179 PIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDVTEVKETG 349
P KK + + P+ + + G NG A + NDA GD + + G
Sbjct: 410 PEKKLYVQTVDSPDDDDEAEGNHDGGAGDDNDADNGGAGDDNDADNGGDGCDGDDDG 466
>SB_42599| Best HMM Match : DUF536 (HMM E-Value=7.2)
Length = 120
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 122 VEKQDAAPEEVTSTEVKESPIKKSPT--KKTEVPESNGKE 235
V K A E + EVKE+ +KK P+ K+T+ E KE
Sbjct: 25 VNKLIAEGEGESGNEVKENKVKKKPSVIKQTQEDEKKTKE 64
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 27.1 bits (57), Expect = 5.5
Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Frame = +2
Query: 137 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG-DAEESNDAT 313
AAPE E +P + + T VPE+ + T D S T
Sbjct: 432 AAPETTVIPETTAAPETSATPETTMVPETTSAPSTTMAPETTATPVTTMAPDTTTSPATT 491
Query: 314 ENGDVTEVKETGVKRKSTVVEE 379
+ T V ET +TVV E
Sbjct: 492 AALETTMVPETTAASDTTVVPE 513
>SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 238
PE+ T + ++ P K+PT+ + E +GKEN
Sbjct: 79 PEDSTKKKRRKKP--KTPTRASAAAEESGKEN 108
>SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 128 KQDAAPEEVTS--TEVKESPIKKSPTKKTEVPESNGKENGT 244
K+ P ++S TEVK++P ++P KK VP + GT
Sbjct: 259 KRRIVPTLISSDKTEVKKTPPSEAPAKKRIVPTPISSDIGT 299
>SB_48649| Best HMM Match : DUF809 (HMM E-Value=1.3)
Length = 222
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 304
E+++ A EEV EV + + K + +G+E GD + ++
Sbjct: 117 EEEEEAEEEVVKREVIGNDKRAGEKNKDDGGNKSGEEVKAEQDAETGAGKEEEGDKDNAD 176
Query: 305 DATENGD 325
+E+GD
Sbjct: 177 KDSEDGD 183
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 284 GDAEESNDATENGDVTEVKETGVKRKSTVVEE--EATE 391
G+A E+ +A+E + E ETG K++ E EA+E
Sbjct: 70 GEASETGEASEASEAGEASETGEAGKASEASETGEASE 107
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 26.6 bits (56), Expect = 7.3
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVKESPIKKSP-TKKTEVPE--SNGKENGTXXXXXXXXXXXXNGDAE 295
E + EE +S E +E K P TK+T+ + +N + + D++
Sbjct: 129 EPVETESEEESSAEEEEDEYKPEPKTKRTKASDKKTNSSKKTAGRPGRRKSAKVISSDSD 188
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEEEATEK 394
+D NG+ ++ + EEE EK
Sbjct: 189 GEDDRDGNGEQSKSGSESDDDEEEEEEEEKEEK 221
>SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/66 (24%), Positives = 24/66 (36%)
Frame = +2
Query: 155 TSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDVTE 334
TST E + SPT KTE ++ G + G ++ + E
Sbjct: 185 TSTPSPELRVSPSPTLKTESTQTKGTTSQQSTQTAKKKPSSRKGSVDKVPEKDGKKPEAE 244
Query: 335 VKETGV 352
K+ GV
Sbjct: 245 TKDEGV 250
>SB_16047| Best HMM Match : rve (HMM E-Value=2e-12)
Length = 233
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESN 226
PE V STE+ E P + T +E+P N
Sbjct: 116 PEPVRSTELPEEPWEDLATDLSEIPGGN 143
>SB_111| Best HMM Match : Drf_FH1 (HMM E-Value=0.31)
Length = 241
Score = 26.6 bits (56), Expect = 7.3
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 8/99 (8%)
Frame = +2
Query: 113 DAAVEKQDAAPEEVTSTEVKES-PIKKSPTKKTEVPESNG---KENGTXXXXXXXXXXXX 280
DAA+ K+ A PEE + + P + + + T +PE + KE
Sbjct: 109 DAAITKEAAIPEEAAIPDEDAAIPEEAAIPEDTAIPEEDAAMPKEAAIADEDAAIPEEAA 168
Query: 281 ----NGDAEESNDATENGDVTEVKETGVKRKSTVVEEEA 385
+ A DA GD ++T + + + EEA
Sbjct: 169 IPQNDNAAIPKKDAISEGDAAIQEDTAIPEEDAAIPEEA 207
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 26.6 bits (56), Expect = 7.3
Identities = 24/106 (22%), Positives = 38/106 (35%), Gaps = 5/106 (4%)
Frame = +2
Query: 32 FALCVTRAVXXXXXXXXXXXXXXXXMADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTE 211
F LC+ AV +DA + APE S E + + K P K E
Sbjct: 7 FGLCLLVAVNAAPATKANKHDSIAEASDAT---EAVAPEAPASPESENTDDFKEPEAKEE 63
Query: 212 VPESNGKENGTXXXXXXXXXX-----XXNGDAEESNDATENGDVTE 334
P + K T + ++E+ +D+ ++GD E
Sbjct: 64 TPAAAPKAEDTPALETSGESKLPDTPVEDEESEDDDDSFDDGDDEE 109
>SB_40705| Best HMM Match : Hormone_5 (HMM E-Value=5.7)
Length = 282
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 199 GGRFLNWRFLDFRGSHLFGCGVLLFNC 119
GG + + L H FGC L F C
Sbjct: 16 GGNIVRLKVLRAPAKHTFGCSALTFGC 42
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 128 KQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN 226
K + APEEV + + +ESP ++ K+ + P+ +
Sbjct: 242 KVEDAPEEVEAPKEEESPKEEDTPKEEDAPKED 274
>SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 281 NGDAEESNDATENGDVTEVKETGVKRKSTVVEEEATE 391
N EE+ + + TEVKETG K E EATE
Sbjct: 185 NVHVEEATSNEKEREATEVKETGSNEK----EREATE 217
>SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 1116
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVP 217
PE V STE+ E P + T TE+P
Sbjct: 824 PEPVRSTELPEEPWEDLATDLTEIP 848
>SB_50003| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 286
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 155 TSTEVKESPIKKSPTKKT 208
+STEV ES +K+SPT KT
Sbjct: 186 SSTEVCESGLKRSPTIKT 203
>SB_38251| Best HMM Match : fn3 (HMM E-Value=2.1e-05)
Length = 352
Score = 26.2 bits (55), Expect = 9.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 146 EEVTSTEVKESPIKKSPTKKTEVPESNGK 232
++V T +KE P++ SP+KK ++ +
Sbjct: 193 DQVVKTPIKEPPMETSPSKKVSEGQTTAR 221
>SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23)
Length = 565
Score = 26.2 bits (55), Expect = 9.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 107 MADAA-VEKQDAAPEEVTSTEVK-ESPIKKSPTKKTEVP 217
+ADA + K+ A PE+ VK E P+ + PT E+P
Sbjct: 286 VADAINLAKRPAQPEKPLKFLVKVEKPVPRPPTPSVEIP 324
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 284 GDAEESNDATENGDVTEVKETGVKRKSTVVEEEAT 388
G+A E+ +A+E G+ E E G +++ EAT
Sbjct: 664 GEAVEAGEASEAGEAIEAGEAGEASEASEAAGEAT 698
>SB_15280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 26.2 bits (55), Expect = 9.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 146 EEVTSTEVKESPIKKSPTKKTEVPESNGK 232
++V T +KE P++ SP+KK ++ +
Sbjct: 27 DQVVKTPIKEPPMETSPSKKVSEGQTTAR 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,473,001
Number of Sequences: 59808
Number of extensions: 134627
Number of successful extensions: 913
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 690807992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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