Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D02
(395 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 39 0.005
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 39 0.005
BC004937-1|AAH04937.1| 174|Homo sapiens NOL5A protein protein. 39 0.005
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 39 0.005
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 39 0.007
Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein. 33 0.45
EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein. 33 0.45
BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium p... 33 0.45
AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD... 33 0.45
BC063134-1|AAH63134.1| 844|Homo sapiens CMYA5 protein protein. 32 0.79
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 31 1.4
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 31 1.4
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 31 1.4
EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein. 31 1.8
AF177292-1|AAD55265.1| 808|Homo sapiens genethonin 3 protein. 31 1.8
BC005342-1|AAH05342.1| 282|Homo sapiens nucleosomal binding pro... 29 4.2
AL391294-1|CAI39708.1| 282|Homo sapiens nucleosomal binding pro... 29 4.2
AF250330-1|AAK14063.1| 282|Homo sapiens nucleosomal binding pro... 29 4.2
AF250329-1|AAK14062.1| 282|Homo sapiens nucleosomal binding pro... 29 4.2
AF170294-1|AAD50987.1| 101|Homo sapiens prothymosin a14 protein. 29 5.6
AF257099-1|AAF71547.1| 105|Homo sapiens prothymosin alpha protein. 29 7.4
BC021144-1|AAH21144.1| 740|Homo sapiens FLJ30092 protein protein. 28 9.7
AF174498-1|AAF36539.1| 1381|Homo sapiens GR AF-1 specific protei... 28 9.7
AB014514-1|BAA31589.3| 3006|Homo sapiens KIAA0614 protein protein. 28 9.7
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/95 (28%), Positives = 42/95 (44%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 286
+A A+ E + PEE E+ E P KK K EVP+ NG E+ + +
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMEDPSISFSKPKKKKSFSK 514
Query: 287 DAEESNDATENGDVTEVKETGVKRKSTVVEEEATE 391
+ S+D E T + + ++KST EE +
Sbjct: 515 EELMSSDLEETAGSTSIPK---RKKSTPKEETVND 546
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/95 (28%), Positives = 42/95 (44%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 286
+A A+ E + PEE E+ E P KK K EVP+ NG E+ + +
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMEDPSISFSKPKKKKSFSK 514
Query: 287 DAEESNDATENGDVTEVKETGVKRKSTVVEEEATE 391
+ S+D E T + + ++KST EE +
Sbjct: 515 EELMSSDLEETAGSTSIPK---RKKSTPKEETVND 546
>BC004937-1|AAH04937.1| 174|Homo sapiens NOL5A protein protein.
Length = 174
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/95 (28%), Positives = 42/95 (44%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 286
+A A+ E + PEE E+ E P KK K EVP+ NG E+ + +
Sbjct: 37 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMEDPSISFSKPKKKKSFSK 94
Query: 287 DAEESNDATENGDVTEVKETGVKRKSTVVEEEATE 391
+ S+D E T + + ++KST EE +
Sbjct: 95 EELMSSDLEETAGSTSIPK---RKKSTPKEETVND 126
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/95 (28%), Positives = 42/95 (44%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 286
+A A+ E + PEE E+ E P KK K EVP+ NG E+ + +
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMEDPSISFSKPKKKKSFSK 514
Query: 287 DAEESNDATENGDVTEVKETGVKRKSTVVEEEATE 391
+ S+D E T + + ++KST EE +
Sbjct: 515 EELMSSDLEETAGSTSIPK---RKKSTPKEETVND 546
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 38.7 bits (86), Expect = 0.007
Identities = 27/95 (28%), Positives = 41/95 (43%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 286
+A A+ E + PEE T E P KK K EVP+ NG E+ + +
Sbjct: 465 LALASSENSSSTPEECEETS--EKPKKKKKQKPQEVPQENGMEDPSISFSKPKKKKSFSK 522
Query: 287 DAEESNDATENGDVTEVKETGVKRKSTVVEEEATE 391
+ S+D E T + + ++KST EE +
Sbjct: 523 EELMSSDLEETAGSTSIPK---RKKSTPKEETVND 554
>Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein.
Length = 916
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENG 241
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKG 652
>EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein.
Length = 916
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENG 241
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKG 652
>BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium
polypeptide 150kDa protein.
Length = 916
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENG 241
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKG 652
>AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD
medium) protein.
Length = 260
Score = 32.7 bits (71), Expect = 0.45
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENG 241
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G
Sbjct: 165 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKG 215
>BC063134-1|AAH63134.1| 844|Homo sapiens CMYA5 protein protein.
Length = 844
Score = 31.9 bits (69), Expect = 0.79
Identities = 19/82 (23%), Positives = 32/82 (39%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENG 322
P+ S EV ++P + K ++PE GK+ G + N E
Sbjct: 289 PQSPESPEVTQNPPTQPKVAKPDLPEEKGKKG--ISSFKSWMSSLFFGSSTPDNKVAEQE 346
Query: 323 DVTEVKETGVKRKSTVVEEEAT 388
D+ V++ TV++ E T
Sbjct: 347 DLETQPSPSVEKAVTVIDPEGT 368
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVK-ESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEES 301
E+ D+ E + +T K + K P K V E +E + D E+
Sbjct: 202 EEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 261
Query: 302 NDATENGDVTEVKETGVKRKSTVVEEEA 385
+ E + VKE KRK + +++A
Sbjct: 262 EEEEEEEEEEPVKEAPGKRKKEMAKQKA 289
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVK-ESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEES 301
E+ D+ E + +T K + K P K V E +E + D E+
Sbjct: 179 EEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 238
Query: 302 NDATENGDVTEVKETGVKRKSTVVEEEA 385
+ E + VKE KRK + +++A
Sbjct: 239 EEEEEEEEEEPVKEAPGKRKKEMAKQKA 266
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVK-ESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEES 301
E+ D+ E + +T K + K P K V E +E + D E+
Sbjct: 202 EEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 261
Query: 302 NDATENGDVTEVKETGVKRKSTVVEEEA 385
+ E + VKE KRK + +++A
Sbjct: 262 EEEEEEEEEEPVKEAPGKRKKEMAKQKA 289
>EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein.
Length = 877
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKE 235
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEE 650
>AF177292-1|AAD55265.1| 808|Homo sapiens genethonin 3 protein.
Length = 808
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/82 (21%), Positives = 32/82 (39%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENG 322
P+ + EV ++P + K ++PE GK+ G + N E
Sbjct: 408 PQSPEAPEVTQNPPTQPKVAKPDLPEEKGKKG--ISSFKSWMSSLFFGSSTPDNKVAEQE 465
Query: 323 DVTEVKETGVKRKSTVVEEEAT 388
D+ V++ TV++ E T
Sbjct: 466 DLETQPSPSVEKAVTVIDPEGT 487
>BC005342-1|AAH05342.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 131 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXN-GDAEESND 307
++ E+ E E +K KK E + NG++ GD +E+ D
Sbjct: 154 EEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENED 213
Query: 308 ATENGDVTEVKETGVK 355
E GD E K+ VK
Sbjct: 214 GKEKGDKKEGKDVKVK 229
>AL391294-1|CAI39708.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 131 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXN-GDAEESND 307
++ E+ E E +K KK E + NG++ GD +E+ D
Sbjct: 154 EEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENED 213
Query: 308 ATENGDVTEVKETGVK 355
E GD E K+ VK
Sbjct: 214 GKEKGDKKEGKDVKVK 229
>AF250330-1|AAK14063.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 131 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXN-GDAEESND 307
++ E+ E E +K KK E + NG++ GD +E+ D
Sbjct: 154 EEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENED 213
Query: 308 ATENGDVTEVKETGVK 355
E GD E K+ VK
Sbjct: 214 GKEKGDKKEGKDVKVK 229
>AF250329-1|AAK14062.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 131 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXN-GDAEESND 307
++ E+ E E +K KK E + NG++ GD +E+ D
Sbjct: 154 EEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENED 213
Query: 308 ATENGDVTEVKETGVK 355
E GD E K+ VK
Sbjct: 214 GKEKGDKKEGKDVKVK 229
>AF170294-1|AAD50987.1| 101|Homo sapiens prothymosin a14 protein.
Length = 101
Score = 29.1 bits (62), Expect = 5.6
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKESP-IKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXN 283
M+DAAV+ E+T+ ++KE + + + P +ENG
Sbjct: 1 MSDAAVDTSS----EITTEDLKEKKEVVEEAENGRDAPAD--EENGEQEADNEVDEEQEE 54
Query: 284 GDAEESNDATENGDVTEVKETGVKRKSTVVEEE 382
G EE + E+GD E E+ +++ +E+
Sbjct: 55 GGEEEGDGEEEDGDEDEGAESATDKRAAEDDED 87
>AF257099-1|AAF71547.1| 105|Homo sapiens prothymosin alpha protein.
Length = 105
Score = 28.7 bits (61), Expect = 7.4
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +2
Query: 107 MADAAVEKQDAAPEEVTSTEVKESP--IKKSPTKKTEVPESNG-KENGTXXXXXXXXXXX 277
M+DAAV+ E+T+ ++KE ++++ + N +ENG
Sbjct: 1 MSDAAVDTSS----EITTEDLKEKKEVVEEAENGRDAPAHGNANEENGEPEADNEVDEEE 56
Query: 278 XNGDAEESNDATENGDVTEVKETGVKRKSTVVEEE 382
G EE + E+GD E E+ +++ +E+
Sbjct: 57 EEGGEEEGDGEEEDGDEDEGAESATGKRAAEDDED 91
>BC021144-1|AAH21144.1| 740|Homo sapiens FLJ30092 protein protein.
Length = 740
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 220
+K P+ ++ E +KSPTKK EVPE
Sbjct: 117 KKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 148
>AF174498-1|AAF36539.1| 1381|Homo sapiens GR AF-1 specific protein
phosphatase protein.
Length = 1381
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 220
+K P+ ++ E +KSPTKK EVPE
Sbjct: 758 KKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 789
>AB014514-1|BAA31589.3| 3006|Homo sapiens KIAA0614 protein protein.
Length = 3006
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 220
+K P+ ++ E +KSPTKK EVPE
Sbjct: 2383 KKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 2414
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,950,516
Number of Sequences: 237096
Number of extensions: 630357
Number of successful extensions: 2091
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2086
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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