Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D02
(395 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19590.1 68417.m02879 DNAJ heat shock N-terminal domain-conta... 34 0.030
At4g36980.1 68417.m05240 expressed protein 31 0.21
At2g22795.1 68415.m02704 expressed protein 31 0.21
At1g45090.1 68414.m05169 Ulp1 protease family protein similar to... 31 0.28
At1g56660.1 68414.m06516 expressed protein 30 0.49
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 0.64
At5g63550.1 68418.m07976 expressed protein 29 1.5
At5g36860.1 68418.m04416 Ulp1 protease family protein contains P... 29 1.5
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 29 1.5
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 29 1.5
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 29 1.5
At2g35410.1 68415.m04340 33 kDa ribonucleoprotein, chloroplast, ... 28 2.0
At4g07380.1 68417.m01133 hypothetical protein 27 3.4
At2g24300.2 68415.m02904 calmodulin-binding protein similar to c... 27 3.4
At2g24300.1 68415.m02905 calmodulin-binding protein similar to c... 27 3.4
At1g27780.1 68414.m03399 Ulp1 protease family protein similar to... 27 3.4
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 27 6.0
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 27 6.0
At5g55480.1 68418.m06910 glycerophosphoryl diester phosphodieste... 26 7.9
At5g41020.1 68418.m04986 myb family transcription factor contain... 26 7.9
At4g26630.1 68417.m03837 expressed protein 26 7.9
At4g18070.2 68417.m02689 expressed protein 26 7.9
At4g18070.1 68417.m02688 expressed protein 26 7.9
At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR... 26 7.9
At2g34170.1 68415.m04182 expressed protein contains Pfam profile... 26 7.9
>At4g19590.1 68417.m02879 DNAJ heat shock N-terminal
domain-containing protein protein YJL162c, Saccharomyces
cerevisiae, PIR2:S56945; contains Pfam PF00226: DnaJ
domain;
Length = 345
Score = 34.3 bits (75), Expect = 0.030
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Frame = +2
Query: 146 EEVTSTEVKESPIKK--SPTKKTEVPESNGKE-NGTXXXXXXXXXXXXNGDAEESNDAT- 313
E V +TE++++P +K +PT+K E P++ K NG N D+ D++
Sbjct: 223 EYVRATEIEKTPTEKEKTPTEKEETPQATNKNTNGASSSCDRDSSLNVNFDSSFRRDSSL 282
Query: 314 ------ENGDVTEVKETGVKRKSTVVEEEA 385
+G+V E KR+ EEEA
Sbjct: 283 SRMSYFNSGNVANQAEERGKREVRESEEEA 312
>At4g36980.1 68417.m05240 expressed protein
Length = 560
Score = 31.5 bits (68), Expect = 0.21
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +2
Query: 122 VEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPES-NGKENGTXXXXXXXXXXXXNGDAEE 298
+E + AAP T T+ + P K + + NGK+N + D EE
Sbjct: 142 LEAKLAAPFLGTRTQPAQPPANKGTYSQVGFSYAGNGKDNSLDADEDDVDDDEDDEDEEE 201
Query: 299 ---SNDATENGDVTEVKETGVKRKSTVV 373
SND+ + G T K+ G+KR +V
Sbjct: 202 EFDSNDSDDEGMETIAKQFGIKRYGWLV 229
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 31.5 bits (68), Expect = 0.21
Identities = 17/87 (19%), Positives = 36/87 (41%)
Frame = +2
Query: 122 VEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEES 301
+EK+++AP+E T + E K+ + E E + N ++E+
Sbjct: 585 IEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKK 644
Query: 302 NDATENGDVTEVKETGVKRKSTVVEEE 382
EN T+ + ++++V + E
Sbjct: 645 EQVEENEKKTDEDTSESSKENSVSDTE 671
>At1g45090.1 68414.m05169 Ulp1 protease family protein similar to
At5g28270, At2g12100, At2g05450, At2g16180, At2g06750;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1210
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +2
Query: 122 VEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 238
+ ++ A PEEV T++K+ +++ ++K +PE GKE+
Sbjct: 841 IPEKVAVPEEVL-TQLKDDVLEEKVSEKVAIPEETGKED 878
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 30.3 bits (65), Expect = 0.49
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 304
EK ++ PEE KE + +K E+ E +GK+N +E
Sbjct: 140 EKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKK 199
Query: 305 DATENGDVTEVKETGVKRKSTV--VEEEATEK 394
E+ + K G K K +E+E EK
Sbjct: 200 QKEESKSNEDKKVKGKKEKGEKGDLEKEDEEK 231
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 0.64
Identities = 21/82 (25%), Positives = 31/82 (37%)
Frame = +2
Query: 119 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 298
A+ D EEV E +ESPI S KK S N ++ +
Sbjct: 167 ALGSDDDDTEEVHEDEEEESPITFSGKKKKSSKSSKKNTNSFTADLLDEEEGTDASNSRD 226
Query: 299 SNDATENGDVTEVKETGVKRKS 364
+ E+ + EV +G K+ S
Sbjct: 227 DENTIEDEESPEVTFSGKKKSS 248
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 28.7 bits (61), Expect = 1.5
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 125 EKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPESN--GKENGTXXXXXXXXXXXXNGDAE 295
+K+ + P+ S E ++P K K TKK ++P GK+ G + D+E
Sbjct: 254 KKRKSTPKRGKSGESSDTPAKRKRQTKKRDLPSDTEEGKDEG-------------DADSE 300
Query: 296 ESNDATENGDVTEVKETGVKRKSTVVEEEATE 391
+ND E D +E+ ++ T E++ E
Sbjct: 301 GTNDPHEEDDAAPEEESDHEKTDTDDEKDEVE 332
>At5g36860.1 68418.m04416 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1204
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/88 (20%), Positives = 28/88 (31%)
Frame = +2
Query: 131 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDA 310
+D A + T I + + + P + NG E
Sbjct: 719 KDVAEPGLVGTHTGADEIADADIEMVDNPSGLPSTSAQEEARDASASTEANGSESEETYE 778
Query: 311 TENGDVTEVKETGVKRKSTVVEEEATEK 394
+GD V+ G + TV+E E EK
Sbjct: 779 PSDGDTAHVEAAGESKLVTVMEVEIPEK 806
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/83 (26%), Positives = 28/83 (33%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENG 322
PEEV + E+ +K KTE P K GT G+ E+ E
Sbjct: 131 PEEVKTKEIPVEEVKAEEPAKTEEP---AKTEGTSGEKEEIVEETKKGETPETAVVEEKK 187
Query: 323 DVTEVKETGVKRKSTVVEEEATE 391
E K+ VVE E
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKE 210
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/83 (26%), Positives = 28/83 (33%)
Frame = +2
Query: 143 PEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENG 322
PEEV + E+ +K KTE P K GT G+ E+ E
Sbjct: 131 PEEVKTKEIPVEEVKAEEPAKTEEP---AKTEGTSGEKEEIVEETKKGETPETAVVEEKK 187
Query: 323 DVTEVKETGVKRKSTVVEEEATE 391
E K+ VVE E
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKE 210
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/88 (20%), Positives = 28/88 (31%)
Frame = +2
Query: 131 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDA 310
+D A + T I + + + P + NG E
Sbjct: 656 KDVAEPGLVGTHTGADEIADADIEMVDNPSGLPSTSAQDEARDASASTEANGSKSEETYE 715
Query: 311 TENGDVTEVKETGVKRKSTVVEEEATEK 394
+GD V+ G + TV+E E EK
Sbjct: 716 PSDGDTAHVEAAGESKLVTVMEVEIPEK 743
>At2g35410.1 68415.m04340 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative similar to
SP|P19684 33 kDa ribonucleoprotein, chloroplast
precursor {Nicotiana sylvestris}; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 308
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 281 NGDAEESNDATENGDVTEVKET 346
+GD+ E+N+A+E+GD E K T
Sbjct: 280 DGDSVEANNASEDGDTVEDKNT 301
>At4g07380.1 68417.m01133 hypothetical protein
Length = 168
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 146 EEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 244
EEV+ EV + K K E ++NG++NGT
Sbjct: 92 EEVSQEEVMVNEETKEVDKMEEETQTNGEDNGT 124
>At2g24300.2 68415.m02904 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 599
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +3
Query: 120 QLKSKTPHPKR*LPRKSRNLQLR---NLPP 200
+L S++P PKR R RNLQL +PP
Sbjct: 70 KLTSRSPEPKRIQDRNGRNLQLHFRTRMPP 99
>At2g24300.1 68415.m02905 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 552
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +3
Query: 120 QLKSKTPHPKR*LPRKSRNLQLR---NLPP 200
+L S++P PKR R RNLQL +PP
Sbjct: 23 KLTSRSPEPKRIQDRNGRNLQLHFRTRMPP 52
>At1g27780.1 68414.m03399 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At5g36850, At3g42730, At1g52020,
At3g24390, At4g05280, At1g25886, At4g03300; contains
Pfam profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1468
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/88 (20%), Positives = 28/88 (31%)
Frame = +2
Query: 131 QDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDA 310
+D A + T I + + + P + NG E
Sbjct: 713 KDVAEPGLVGTHTGADEIADADIEMVDNPSGLPSTSAQEEARDASASTEANGSESEEIYE 772
Query: 311 TENGDVTEVKETGVKRKSTVVEEEATEK 394
+GD V+ G + TV+E E EK
Sbjct: 773 PSDGDTAHVEAAGESKLVTVMEVEIPEK 800
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 26.6 bits (56), Expect = 6.0
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +2
Query: 158 STEVKESPIKKSPTKKTEVPESNGKENGTXXXXX---XXXXXXXNGDAEESNDATENGDV 328
S++ E + K+ K + E +EN T N D E+N + + ++
Sbjct: 255 SSDEDEPKVLKTNNSKADKDEDE-EENETSDDEAEPKALKLSNSNSDNGENNSSDDEKEI 313
Query: 329 TEVKETGVKRKSTVVEEE 382
T K T K KS +EE
Sbjct: 314 TISKITSKKIKSNTADEE 331
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 281 NGDAEESNDATENGDVTEVKETGVKRKSTVVEEEATEK 394
NG E +GD V+ G + TV+E E EK
Sbjct: 760 NGSESEETYEPSDGDTAHVEAAGESKLVTVMEVEIPEK 797
>At5g55480.1 68418.m06910 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 766
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -3
Query: 228 PLLSGTSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAAS 112
PL S GDF + L+ +T+S A CFS S
Sbjct: 319 PLAEYLSFMDNGDFSVDGLLSDFPLTASSAVDCFSHLGS 357
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 26.2 bits (55), Expect = 7.9
Identities = 22/87 (25%), Positives = 33/87 (37%)
Frame = +2
Query: 134 DAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDAT 313
D EE EVK KK P+ ++V + N + + EE N
Sbjct: 173 DLGAEENIDKEVKRKNNKKKPSVDSDVEDINLDSTNDGKKKRKKKKQSEDSETEE-NGLN 231
Query: 314 ENGDVTEVKETGVKRKSTVVEEEATEK 394
D + ++ K+K + V EA EK
Sbjct: 232 STKDAKKRRKKKKKKKQSEV-SEAEEK 257
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 146 EEVTSTEVKESPIKKSPTK--KTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATEN 319
+E T++ E+ KK+ + + E ++NG ++G + ++ EN
Sbjct: 143 KETKETDITEADHKKAGKEDIQHEADKANGTKDGNTGDIKEEGTLVDEDKGTDMDEKVEN 202
Query: 320 GDVTEVKETGVKRKSTVVEEEATEK 394
GD + E ++ EE T++
Sbjct: 203 GDENKQVENVEGKEKEDKEENKTKE 227
>At4g18070.2 68417.m02689 expressed protein
Length = 228
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 155 TSTEVKESPIKKSPTKKTEVPESNGKENG 241
TS+ +S +K++ K + +PESNG G
Sbjct: 156 TSSGATDSDVKENEGKTSPLPESNGVPEG 184
>At4g18070.1 68417.m02688 expressed protein
Length = 262
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 155 TSTEVKESPIKKSPTKKTEVPESNGKENG 241
TS+ +S +K++ K + +PESNG G
Sbjct: 190 TSSGATDSDVKENEGKTSPLPESNGVPEG 218
>At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1103
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 108 WQTQQLKSKTPHPKR*LPRKSRNLQLRNLPPKKL 209
WQ ++ + + P+ LPRK + L+ N P K+L
Sbjct: 562 WQPRETRLRLPNGLVYLPRKLKWLRWENCPLKRL 595
>At2g34170.1 68415.m04182 expressed protein contains Pfam profile:
PF05097 protein of unknown function (DUF688)
Length = 523
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 155 TSTEVKESPIKKSPTKKTEVPESNGKE 235
TS E + S +KK P +E PE GK+
Sbjct: 380 TSNENRSSNVKKLPETISEEPEMEGKK 406
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,673,455
Number of Sequences: 28952
Number of extensions: 95011
Number of successful extensions: 431
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 565902384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -